Gene
| Gene Model ID | pfu_aug1.0_13221.1_03334 |
|---|---|
| Locus | scaffold13221.1 : 7461 ... 24195 : - |
| To GenomeBrowser | scaffold13221.1:7461..24195 |
| Genes list of scaffold | scaffold13221.1 |
| Synonym | pfu_aug2.0_31.1_03451 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13221.1_03334.t1 | 1 | 1 | DUF1042 | 1 | 116 | 1.3e-15 | 57.3 | 3.5e-19 | 1.7e-15 | 56.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13221.1_03334.t1 | gi|76253826|ref|NP_001029005.1| | spermatogenesis associated 4 [Ciona intestinalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13221.1_03334.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13221.1_03334.t1 atgcactcctacaacaatggcacatcattagactcaaaactcaaaaactggagtctcctcaaattgttcatcaaacggca taaactagaaatccctgatgaattggtggaagggacgatacattgtaaggaaggagctgcggcattgctatgtgagaaga tatatgagatgctgaccaacagaaagtgggtatctgtaagttctaaaaaagtacctccagaatatgagcccgatttcact gaccgggcatatcagaatcagttgcccatgcatgctcgttcaacagcctcaaagtccattaaaaacaacctcagaattac agaaaccatggcagaccctaaccttatactcagcgctcaaaagtcccaaaagataatcaacgaccacattcagcatcgcc aacaagagcgggcagaaaaccccgcccgttttaacgtcaagcccaccctgggcgagagatgtctccgacgcccacctccc acgccagggcaaaccacctttgataaagatagtactcaacacacacttggtgtggacccaagtcagctccccgggggaga aggtatatatttttatttgtttttatga |
|
Protein
| Protein ID | pfu_aug1.0_13221.1_03334.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13221.1_03334.t1 MHSYNNGTSLDSKLKNWSLLKLFIKRHKLEIPDELVEGTIHCKEGAAALLCEKIYEMLTNRKWVSVSSKKVPPEYEPDFT DRAYQNQLPMHARSTASKSIKNNLRITETMADPNLILSAQKSQKIINDHIQHRQQERAENPARFNVKPTLGERCLRRPPP TPGQTTFDKDSTQHTLGVDPSQLPGGEGIYFYLFL |
|