Gene
| Gene Model ID | pfu_aug1.0_1324.1_58436 |
|---|---|
| Locus | scaffold1324.1 : 106666 ... 123110 : + |
| To GenomeBrowser | scaffold1324.1:106666..123110 |
| Genes list of scaffold | scaffold1324.1 |
| Synonym | pfu_aug2.0_60.1_00162 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1324.1_58436.t1 | 2 | 1 | adh_short_C2 | 11 | 108 | 5.9e-09 | 36.0 | 2.3e-07 | 0.0011 | 18.7 |
| pfu_aug1.0_1324.1_58436.t1 | 1 | 1 | adh_short | 28 | 106 | 1.2e-10 | 41.6 | 2.7e-14 | 1.4e-10 | 41.3 |
| pfu_aug1.0_1324.1_58436.t1 | 2 | 2 | adh_short_C2 | 113 | 141 | 5.9e-09 | 36.0 | 1.6e-06 | 0.0081 | 15.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1324.1_58436.t1 | gi|222099317|ref|YP_002533885.1| | 3.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_1324.1_58436.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1324.1_58436.t1 atgataaatgagttaaagaagatcctgacgataatcacaacatcactcacaatagagcgcaaaattaaacatcgacggac ccttagcaagctagaggtaacttacactataggagatttaacagaagacgctgtgcggagagaactaataaattctacag tatctgcgtttggagtgatcgatgtactaatcaacaatgctggaattgctaaacttggaccaattgccgacgtgtcggag gaagactatcgtagagttcttgaggtcaatcaaacgactccttatttactcactcaacttgctgttccacatctgaaaaa gagcaaaggacgactaggaacacctaaggatatagctgaggcagtcgtcttccttataacagcaacatggataacaggag aaaacatgatcgtcgatggaggacgtcagctattcaccaagctacctgagatagaacaagcacagctttga |
|
Protein
| Protein ID | pfu_aug1.0_1324.1_58436.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1324.1_58436.t1 MINELKKILTIITTSLTIERKIKHRRTLSKLEVTYTIGDLTEDAVRRELINSTVSAFGVIDVLINNAGIAKLGPIADVSE EDYRRVLEVNQTTPYLLTQLAVPHLKKSKGRLGTPKDIAEAVVFLITATWITGENMIVDGGRQLFTKLPEIEQAQL |
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