Gene
| Gene Model ID | pfu_aug1.0_1327.1_36952 |
|---|---|
| Locus | scaffold1327.1 : 14206 ... 16871 : + |
| To GenomeBrowser | scaffold1327.1:14206..16871 |
| Genes list of scaffold | scaffold1327.1 |
| Synonym | pfu_aug2.0_61.1_03534 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1327.1_36952.t1 | 2 | 1 | 7tm_1 | 1 | 129 | 1.1e-06 | 28.0 | 1.1e-08 | 3.4e-05 | 23.1 |
| pfu_aug1.0_1327.1_36952.t1 | 2 | 1 | 7TM_GPCR_Srw | 7 | 121 | 1.1e-06 | 28.0 | 9.7e-05 | 0.29 | 10.2 |
| pfu_aug1.0_1327.1_36952.t1 | 2 | 2 | 7TM_GPCR_Srw | 160 | 242 | 1.1e-06 | 28.0 | 1.1e-08 | 3.2e-05 | 23.2 |
| pfu_aug1.0_1327.1_36952.t1 | 2 | 2 | 7tm_1 | 162 | 238 | 1.1e-06 | 28.0 | 0.0065 | 19.0 | 4.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1327.1_36952.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1327.1_36952.t1 atgcacattctgtttttatggttagctattgtggaccttctaacattgtttagctacactgccttcgttatttactttct gtttgtgacaaagccagttgaagcgtacggccattcgagacaaggcatttatctcgtccttatttcgtataacctgtatg tcttattttatacagcatcgaagtggatgacaataagcctgtctatttttagagctattcgactgttctcacctcaacat agagggaagtggtgtacacccaaacgagcaaacatcgccgccatatgcgtggttattggtgctatagttatttgggggac tccatgttacatgtactatgacgtaagagaagtacacaatagtacaaatacaactgagaaggcgtactggctgaagaagt ccgatatcgcacaaaataacacatggtacagcgagttcangagactaggccttctgggtgcacaagatccacaaatcaga aaattcactatcctattgtccgtcctggctataatgtacgtagccgccggtttgacaatggggatttatgcattttattc tgcaaccaagaaaacagatgaatcacagttattctactttacacaaagcgctttcattaacaattttacagatccgatgg aattactgaattgttcagtcaattttattttcctcctgctgatgtatgggaaatacaaagatacatttcaggctatgttt tcccgcagaaatgatgagattgacgacaatggccctgcacctgatatcggaagacgtcatgatatgcaagtcactgtaaa tgacgtagatatcatgttctaa |
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Protein
| Protein ID | pfu_aug1.0_1327.1_36952.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1327.1_36952.t1 MHILFLWLAIVDLLTLFSYTAFVIYFLFVTKPVEAYGHSRQGIYLVLISYNLYVLFYTASKWMTISLSIFRAIRLFSPQH RGKWCTPKRANIAAICVVIGAIVIWGTPCYMYYDVREVHNSTNTTEKAYWLKKSDIAQNNTWYSEFXRLGLLGAQDPQIR KFTILLSVLAIMYVAAGLTMGIYAFYSATKKTDESQLFYFTQSAFINNFTDPMELLNCSVNFIFLLLMYGKYKDTFQAMF SRRNDEIDDNGPAPDIGRRHDMQVTVNDVDIMF |
|