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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1327.1_36955
Locus scaffold1327.1 : 41933 ... 46245 : -
To GenomeBrowser scaffold1327.1:41933..46245
Genes list of scaffold scaffold1327.1
Synonym pfu_aug2.0_61.1_03532

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1327.1_36955.t1 1 1 7tm_1 1 142 7.5e-19 67.8 1.2e-22 8.6e-19 67.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1327.1_36955.t1 gi|321473713|gb|EFX84680.1| hypothetical protein DAPPUDRAFT_194423 [Daphnia pulex] 4.0e-19

Transcript
Transcript IDpfu_aug1.0_1327.1_36955.t1
Definition-
>pfu_aug1.0_1327.1_36955.t1
atggatgtttggaccgatcggctgtgacctgtacgcctttacctgctttacggccactctttctaacatgatgacgtatg
tcgccatcagcgtgtatcgcttcttgaccatctgccatagaaacgatgcaggaatttatgtccagaggacgagcacggtg
agttggatcatttgtgctatctgggtttactcactactctgggctacgatcccattcatgggctggggctcgtatgggct
ggagaagttcaagacctcttgttcagtagcatggactgaaacgtcaagtgatggaaaatcgttcgtcttatctctgttcg
tctttgttctcttcgtgccagtttgctctatgggatatatgtacctcaaattgatcaagtccataaaggggaaaatctca
tccatccctgaacaaagtacctcgacagaagatacaatgaatatcaagtgtggtctccatggagtccaggtggtacatga
catagatagtcgagttatcaaggtataa

Protein
Protein IDpfu_aug1.0_1327.1_36955.t1
Definition-
>pfu_aug1.0_1327.1_36955.t1
WMFGPIGCDLYAFTCFTATLSNMMTYVAISVYRFLTICHRNDAGIYVQRTSTVSWIICAIWVYSLLWATIPFMGWGSYGL
EKFKTSCSVAWTETSSDGKSFVLSLFVFVLFVPVCSMGYMYLKLIKSIKGKISSIPEQSTSTEDTMNIKCGLHGVQVVHD
IDSRVIKV

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