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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13287.1_68622
Locus scaffold13287.1 : 76 ... 10331 : +
To GenomeBrowser scaffold13287.1:76..10331
Genes list of scaffold scaffold13287.1
Synonym pfu_aug2.0_133.1_10329

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_13287.1_68622.t1 1 1 VWA 29 209 3.0e-37 128.0 1.10001e-40 5.4e-37 127.2
pfu_aug1.0_13287.1_68622.t1 1 1 VWA_2 29 202 2.6e-13 50.4 8.0e-17 4.0e-13 49.8

Transcript
Transcript IDpfu_aug1.0_13287.1_68622.t1
Definition-
>pfu_aug1.0_13287.1_68622.t1
atgcccttgaaactgataaaaattcaatattttgcggttcctgacatttatagtgaagcaggttgtgattcaacattgcc
ttctgatatagtattcctcgtcgacgaaagtgggagtgtcaatggaaataccacatacacaaatctaacgaattttgaac
gacaaatggacttcgttgcaacctttattggtggtttcaagttaggaaaggatggtgctcgagtcggacttgtaacgttc
tccacggacgtcgtaattgagtactatctcaaccaatatcaagatttacggactatacaacgaaaaacaagacaagtagg
ttacacccatccaggtctcacgtttacgaatatgggcttagacgaagtgaggacaaaggtgtttataccaagtagaggtg
atagaccgaacgcggccaatgttcttgtggtggtaacggatggtgaatctaatcttaagacactgacagctatttcagcc
agtcagatccatgcagcgaacattacagtctttgctattggaattggtagcaaaactaacaaacacgaacttggtatcat
agcctctgattcaaagcatgttttgactgttaatgatttcaaagatctgcgcggtattcagggtcaacttcaacaaggaa
cgtgtaaagttattaaagcacaaccaaccacacctgggcctacaacaacaacaccgaagccaacaacaactacatcaaaa
cctacaacaactacaactacaccaaaacctacaacaacaccaaaaccaacaacaacaacaccaaaacccacaacaagtac
aacaacaccaaaacctacaacaacaccaaaacctacaacaacaacaacaacaccaaaacctacaacaactacaacaacac
caaaacctacaacaactacaacaacaccaaaacctacaacaactacaacaacaccaaaacctacaacaacaccaaaacct
acaacaactacaacaacacctaaacctacaacaacaacaccaaaacccacagcaacaccaaatcccacaacaacaacaac
acgaaatcctacaaaaactagaacacctaaaccaacaacaactacaacaacaccaaaaccaacgacatctacaacactaa
aacacaaaacaactacaacaccaaaaccaacaacatttaaaccgacgacaacgtcaaaacctacaacaaaaaccaaacca
acaacagcatcaaaacagatgacaacaaaacccacttcaactcaaaaaacagcaacaacgactcgtgtgccaaggacaaa
accgagaaaacctacaacaagacataaactcacaacaacattaaaaccctcaagacctaatcgtccaaagacaacgaaac
ccaaatcaacaatagcacaaaagaccagttcaaagcgaaataccatcacaacatcaaaacatccacataatggcggaaca
aatggtaatgatacagacacaggagcccaagttacagagctcgttttaccagggtggttctcctatttagaggtaggaat
tatttccggtgtggcaattttgacgataggtgccgccacttgctgttgccataaattttgttgtgctggaaaacgcagag
aaaacgatgacgacgaagaagatgaaaagaaaaacgcatggaagaaagatttcagagagccaatgaaacgacctatcagt
atctctgtgtaa

Protein
Protein IDpfu_aug1.0_13287.1_68622.t1
Definition-
>pfu_aug1.0_13287.1_68622.t1
MPLKLIKIQYFAVPDIYSEAGCDSTLPSDIVFLVDESGSVNGNTTYTNLTNFERQMDFVATFIGGFKLGKDGARVGLVTF
STDVVIEYYLNQYQDLRTIQRKTRQVGYTHPGLTFTNMGLDEVRTKVFIPSRGDRPNAANVLVVVTDGESNLKTLTAISA
SQIHAANITVFAIGIGSKTNKHELGIIASDSKHVLTVNDFKDLRGIQGQLQQGTCKVIKAQPTTPGPTTTTPKPTTTTSK
PTTTTTTPKPTTTPKPTTTTPKPTTSTTTPKPTTTPKPTTTTTTPKPTTTTTTPKPTTTTTTPKPTTTTTTPKPTTTPKP
TTTTTTPKPTTTTPKPTATPNPTTTTTRNPTKTRTPKPTTTTTTPKPTTSTTLKHKTTTTPKPTTFKPTTTSKPTTKTKP
TTASKQMTTKPTSTQKTATTTRVPRTKPRKPTTRHKLTTTLKPSRPNRPKTTKPKSTIAQKTSSKRNTITTSKHPHNGGT
NGNDTDTGAQVTELVLPGWFSYLEVGIISGVAILTIGAATCCCHKFCCAGKRRENDDDEEDEKKNAWKKDFREPMKRPIS
ISV

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