Gene
| Gene Model ID | pfu_aug1.0_13287.1_68623 |
|---|---|
| Locus | scaffold13287.1 : 10340 ... 17315 : - |
| To GenomeBrowser | scaffold13287.1:10340..17315 |
| Genes list of scaffold | scaffold13287.1 |
| Synonym | pfu_aug2.0_133.1_10330 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13287.1_68623.t1 | 2 | 1 | Tyrosinase | 55 | 102 | 3.9e-14 | 53.3 | 2.6e-18 | 3.9e-14 | 53.3 |
| pfu_aug1.0_13287.1_68623.t1 | 2 | 2 | Tyrosinase | 258 | 258 | 3.9e-14 | 53.3 | 0.31 | 4600.0 | -2.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13287.1_68623.t1 | gi|341878949|gb|EGT34884.1| | CBN-TYR-2 protein [Caenorhabditis brenneri] | 9.0e-28 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13287.1_68623.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13287.1_68623.t1 atgaggggtagagtaacgaatggtccatttgcattctggcaaacgcccgctggtccactagtacggaatggcggtcaaga aggggaattatttacatataaccacataagagcagttatgactaggtctcgcttagaagaaattagcgaaccacatgcac cacctcctttcgattttgagatccgccatggtgatgtccatcagatggtgggtggtattatggcaccggcagaaacggcc ggatacgaccctgtgttctttttacatcattgcttcgtggattatctatgggaagtatttagaaggagtcagaaagaaaa aggtgttgaccctacaacggattatcctagaagatatggaccaagtgcgcatgcgccaaaggagcaaatgggattgggtc gtctgctcaacgagcatggtttgagtgacatgtttacatcgagactgtacacgtacgaaccgtctccgacgtgcagtttc agaaggcctacctgtggttcaaattatcttacatgtgaatttggatttggtagacctcagtgtgttacattagaaatgtt gtcaaccacacccactcaaacaagaaggtcaaatgtgccattgcaatggcaacagttcgtaccacagttacaaagaggag tacccagaagtcctgttccaaatcagttccggtctgcaatagcccgagctcgagcccaacgacaaaacaacgcaggacaa aatagaccacagaatgttaatcagttcggtgcaccaagaaggtttggtcgcacaaaaagacaggccgatggacatgcgat tgatggtggacgattaactcaaatgggacaaaatatcttgacacaattcggaggaaatcaactatcagcattcattcgga ataaaaccaaaaattcaaaccaaggaagcgctacccaagaagttcaagctgcggcaccacaaactgatattttccaagtt atgaaagacggggatagtgaacttgtagtcagtccggttacaaacatatgtccttcttcaagtccccaacgtgtcattca aaatcttttccaactcaatggtatttcagactcacgggtttgggtatatattccggttcgtgttatctataagcgccagc ccgagcagatgaaatttgaagcattcccggtagaggccggcaccatgaaggcttcgaaagacatctatgacccaactagg tatactgaactcgccagtcatttcacttatgaatttaaccatccaagaacatgccgtgatatggatggaatttacacaaa aatcatggtacacagcgatggtttgaattaccatggtacatatagggagtttgcccttgtggatgcccgtcaaccatttg ctacctcagtggtgtacatcgccattaagagtccagaaaaatggaagacggaagctttactttcgggctacgacccctgt ggaaacgtgtgcaaaccatactgcaggaacgggaagcacttcgcaccatgtcatggtgcactcagacttaccgatgaaac aaacaaagggagcagaacgcctataaattacggcatggactacggtgaggcgacaaagatggtttgggatgtttctattg acggaattccagtatttaacgacgataaaatatttatgcagcttgtgtgtaattaa |
|
Protein
| Protein ID | pfu_aug1.0_13287.1_68623.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13287.1_68623.t1 MRGRVTNGPFAFWQTPAGPLVRNGGQEGELFTYNHIRAVMTRSRLEEISEPHAPPPFDFEIRHGDVHQMVGGIMAPAETA GYDPVFFLHHCFVDYLWEVFRRSQKEKGVDPTTDYPRRYGPSAHAPKEQMGLGRLLNEHGLSDMFTSRLYTYEPSPTCSF RRPTCGSNYLTCEFGFGRPQCVTLEMLSTTPTQTRRSNVPLQWQQFVPQLQRGVPRSPVPNQFRSAIARARAQRQNNAGQ NRPQNVNQFGAPRRFGRTKRQADGHAIDGGRLTQMGQNILTQFGGNQLSAFIRNKTKNSNQGSATQEVQAAAPQTDIFQV MKDGDSELVVSPVTNICPSSSPQRVIQNLFQLNGISDSRVWVYIPVRVIYKRQPEQMKFEAFPVEAGTMKASKDIYDPTR YTELASHFTYEFNHPRTCRDMDGIYTKIMVHSDGLNYHGTYREFALVDARQPFATSVVYIAIKSPEKWKTEALLSGYDPC GNVCKPYCRNGKHFAPCHGALRLTDETNKGSRTPINYGMDYGEATKMVWDVSIDGIPVFNDDKIFMQLVCN |
|