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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13294.1_53930
Locus scaffold13294.1 : 12316 ... 26006 : +
To GenomeBrowser scaffold13294.1:12316..26006
Genes list of scaffold scaffold13294.1
Synonym pfu_aug2.0_14.1_13369

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_13294.1_53930.t1 1 1 Mab-21 110 310 1.4e-13 50.6 8.5e-17 6.3e-13 48.5

Transcript
Transcript IDpfu_aug1.0_13294.1_53930.t1
Definition-
>pfu_aug1.0_13294.1_53930.t1
atggagcaagaaagattcttgagttcaatttcaaggtgtctgtattatgcaaccaggaatgcagttggaactgaagataa
tgtgactgttgagcgacttgtgagggacatattaagctgtgtatatacagacttgctcacaaatattacttcgggcgtta
tcgattctccatccacattcgctagaagtgtaggaactttgactgccaaatattctaaaccgtttttggaatccatcttc
aactatattggtgtgttgaccaaattcatcaaaatacagaaaattgtagtcagtggaagtcgatctgaggggtttgactt
tgaaagctctgattttgaccttatgattatgattgaaaaattattaaaaatgaatgggtccgatgatgcaacaggcagta
acgaacttcattttcaaattgaagatgacactaatgacccaggattcgttagggtgaaagtactttctgagctaacacag
ccttggacgcttatatccgaatatcacgaaggagggtactatctttccagtagcatgttgttagaacacttccgaagtat
cttaaaattcatgagagtcacaagtttcttacatgggccatgtctttctcttgaattggaaacagaagaagacaatgact
tcgcctttgttctcaagcaagatacatggccgacgctagccggaggatgtatccatcgcctcgctaagagaggatggcct
tcaaataatgttttactagaaatacttaaaaatggagtcttatatgtccctataggttttccattatccccattatggtc
aatacaatggagattgtcgttctctattgctgagaatttgctggtccggtccatgaaccattctcaattcttgacgtacg
cattgctgaagctgacattgaaggaagttattgacgctgatagtaacatcaaagctatgaacattgattttgttaaggtg
aaatcaaatacctataacgtgtcccaaatcatggttttcaaccttcaaaatagtcaaaaacagtcaaaaaatgactctaa
aaatagaccttattcttacttcatttttacatattttgactaa

Protein
Protein IDpfu_aug1.0_13294.1_53930.t1
Definition-
>pfu_aug1.0_13294.1_53930.t1
MEQERFLSSISRCLYYATRNAVGTEDNVTVERLVRDILSCVYTDLLTNITSGVIDSPSTFARSVGTLTAKYSKPFLESIF
NYIGVLTKFIKIQKIVVSGSRSEGFDFESSDFDLMIMIEKLLKMNGSDDATGSNELHFQIEDDTNDPGFVRVKVLSELTQ
PWTLISEYHEGGYYLSSSMLLEHFRSILKFMRVTSFLHGPCLSLELETEEDNDFAFVLKQDTWPTLAGGCIHRLAKRGWP
SNNVLLEILKNGVLYVPIGFPLSPLWSIQWRLSFSIAENLLVRSMNHSQFLTYALLKLTLKEVIDADSNIKAMNIDFVKV
KSNTYNVSQIMVFNLQNSQKQSKNDSKNRPYSYFIFTYFD

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