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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13304.1_61183
Locus scaffold13304.1 : 2596 ... 26079 : +
To GenomeBrowser scaffold13304.1:2596..26079
Genes list of scaffold scaffold13304.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_13304.1_61183.t1 1 1 ANF_receptor 50 135 1.7e-10 40.2 2.2e-14 3.2e-10 39.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_13304.1_61183.t1 gi|270011251|gb|EFA07699.1| hypothetical protein TcasGA2_TC002175 [Tribolium castaneum] 2.0e-24

Transcript
Transcript IDpfu_aug1.0_13304.1_61183.t1
Definition-
>pfu_aug1.0_13304.1_61183.t1
atgcgaaattttactatttttcatggaattatcttaacatattctagttttcttttcggaaattgtgatgaagaaaagaa
agaaatattaccagtttcctttcttgcctcggtttctaaaggtactggaatgggaaagttatacggtggagcattctatc
gtgcaattaaagacatcaatggagacccttcgctccttccgaaacataacatttctccaatttttgcggacacttattcg
gatgtattagctgctactaagtttatgtctgatcatcactgtgaaaatgatactttggcttttattggaccggaaggaac
atgtgcaattgctgcaacgatgtccgcagcatggaacaaaccaatgattgcttaccatacttttttttgtcgacgcacga
gtaatgctttaggggtagaatactctacttccgtttgttctattaacagaaaaattaaataccacgaagtctgccgaaga
cgcacgacttcggcaatgttcgttaccatacattttcatggtattcagggattcgaggtgtacatcgacccacaaggaga
tgcagaaggaaactatagtctactcagcctaaatatgacaaagaataaacctccatcattacaagcttttggtggattcc
aacgtaaatcaaatggtcttggaattccgaacttcagtctagtacaagagatagactggccattagggcacccacctcta
gatcaaccaaagtgtggatttgatgggaagaaatgtgaacataaacctgactggaaattggcaacgttttgtagtcttgt
cggagctgtcgttgctcttgctgccattttcgtgttcagatattacagatatgaaaagaaattagctcggcttctttgga
agatagaatttaaagatttagtcctactggattctgtagaagaaattgtcacgcataggaagcctaaggaaacaaatgga
aaatgtgttgatgtggcactatttcgctttcgtaatcattag

Protein
Protein IDpfu_aug1.0_13304.1_61183.t1
Definition-
>pfu_aug1.0_13304.1_61183.t1
MRNFTIFHGIILTYSSFLFGNCDEEKKEILPVSFLASVSKGTGMGKLYGGAFYRAIKDINGDPSLLPKHNISPIFADTYS
DVLAATKFMSDHHCENDTLAFIGPEGTCAIAATMSAAWNKPMIAYHTFFCRRTSNALGVEYSTSVCSINRKIKYHEVCRR
RTTSAMFVTIHFHGIQGFEVYIDPQGDAEGNYSLLSLNMTKNKPPSLQAFGGFQRKSNGLGIPNFSLVQEIDWPLGHPPL
DQPKCGFDGKKCEHKPDWKLATFCSLVGAVVALAAIFVFRYYRYEKKLARLLWKIEFKDLVLLDSVEEIVTHRKPKETNG
KCVDVALFRFRNH

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