Gene
| Gene Model ID | pfu_aug1.0_13306.1_17980 |
|---|---|
| Locus | scaffold13306.1 : 6612 ... 14112 : - |
| To GenomeBrowser | scaffold13306.1:6612..14112 |
| Genes list of scaffold | scaffold13306.1 |
| Synonym | pfu_aug2.0_110.1_00261 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | calmodulin like |
| Description | Blast best hit to DDBJ BT074421 (Osmerus mordax) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13306.1_17980.t1 | 4 | 1 | EF-hand_6 | 1 | 29 | 4.6e-27 | 91.4 | 5.1e-12 | 3.8e-09 | 35.6 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 1 | EF-hand_1 | 1 | 28 | 1.7e-37 | 123.8 | 8.0e-12 | 6.0e-09 | 34.5 |
| pfu_aug1.0_13306.1_17980.t1 | 2 | 1 | EF-hand_7 | 2 | 61 | 7.7e-35 | 118.8 | 4.0e-18 | 2.9e-15 | 56.1 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 1 | EF-hand_5 | 2 | 25 | 2.3e-25 | 86.7 | 1.0e-09 | 7.5e-07 | 28.2 |
| pfu_aug1.0_13306.1_17980.t1 | 2 | 1 | EF-hand_9 | 4 | 63 | 1.7e-12 | 47.0 | 2.8e-11 | 2.1e-08 | 33.9 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 1 | EF-hand_8 | 5 | 26 | 9.5e-30 | 101.9 | 0.00018 | 0.14 | 11.8 |
| pfu_aug1.0_13306.1_17980.t1 | 2 | 1 | SPARC_Ca_bdg | 5 | 58 | 7.3e-07 | 29.2 | 5.3e-05 | 0.039 | 13.9 |
| pfu_aug1.0_13306.1_17980.t1 | 2 | 1 | EF-hand_4 | 10 | 61 | 7.3e-07 | 28.8 | 0.00016 | 0.12 | 12.1 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 2 | EF-hand_8 | 13 | 63 | 9.5e-30 | 101.9 | 4.3e-16 | 3.2e-13 | 49.0 |
| pfu_aug1.0_13306.1_17980.t1 | 3 | 1 | UPF0154 | 16 | 45 | 8.3e-06 | 25.3 | 0.00061 | 0.45 | 10.1 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 2 | EF-hand_1 | 36 | 63 | 1.7e-37 | 123.8 | 4.2e-12 | 3.1e-09 | 35.4 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 2 | EF-hand_6 | 37 | 62 | 4.6e-27 | 91.4 | 7.3e-06 | 0.0054 | 16.5 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 2 | EF-hand_5 | 37 | 61 | 2.3e-25 | 86.7 | 2.0e-07 | 0.00015 | 20.9 |
| pfu_aug1.0_13306.1_17980.t1 | 3 | 2 | UPF0154 | 58 | 80 | 8.3e-06 | 25.3 | 0.77 | 570.0 | 0.2 |
| pfu_aug1.0_13306.1_17980.t1 | 2 | 2 | SPARC_Ca_bdg | 66 | 127 | 7.3e-07 | 29.2 | 6.4e-05 | 0.048 | 13.7 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 3 | EF-hand_8 | 70 | 90 | 9.5e-30 | 101.9 | 2.4e-05 | 0.018 | 14.6 |
| pfu_aug1.0_13306.1_17980.t1 | 2 | 2 | EF-hand_4 | 72 | 128 | 7.3e-07 | 28.8 | 2.3e-05 | 0.017 | 14.8 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 3 | EF-hand_6 | 73 | 102 | 4.6e-27 | 91.4 | 1.9e-12 | 1.4e-09 | 36.9 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 3 | EF-hand_1 | 73 | 101 | 1.7e-37 | 123.8 | 5.7e-13 | 4.2e-10 | 38.1 |
| pfu_aug1.0_13306.1_17980.t1 | 2 | 2 | EF-hand_7 | 74 | 128 | 7.7e-35 | 118.8 | 2.8e-20 | 2.1e-17 | 63.0 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 3 | EF-hand_5 | 74 | 98 | 2.3e-25 | 86.7 | 2.6e-10 | 1.9e-07 | 30.1 |
| pfu_aug1.0_13306.1_17980.t1 | 2 | 2 | EF-hand_9 | 77 | 127 | 1.7e-12 | 47.0 | 0.00029 | 0.22 | 11.4 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 4 | EF-hand_8 | 86 | 128 | 9.5e-30 | 101.9 | 3.5e-15 | 2.6e-12 | 46.1 |
| pfu_aug1.0_13306.1_17980.t1 | 3 | 3 | UPF0154 | 89 | 117 | 8.3e-06 | 25.3 | 0.00025 | 0.19 | 11.3 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 4 | EF-hand_1 | 109 | 128 | 1.7e-37 | 123.8 | 1.5e-07 | 0.00011 | 21.2 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 4 | EF-hand_5 | 113 | 127 | 2.3e-25 | 86.7 | 0.0009 | 0.67 | 9.4 |
| pfu_aug1.0_13306.1_17980.t1 | 4 | 4 | EF-hand_6 | 115 | 128 | 4.6e-27 | 91.4 | 0.087 | 65.0 | 3.8 |
Transcript
| Transcript ID | pfu_aug1.0_13306.1_17980.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13306.1_17980.t1 aatttaaggaggcgtttagcttgtttgacaaggatggtgatggtacaataacaaccaaggaactcggtactgtaatgagg tcactaggtcaaaatccaaccgaggctgaactccaggatatgatcaacgaagtagacgctgatggaaatgggacaataga tttcccagaattcttaaccatgatggcgaagaaaatgaaagacaccgacacggaagaggaaattcgagaggcgtttagag tgttcgataaagacggcaatggtttcattagtgcagctgaactacgtcacgtgatgacaaatctcggagaaaaactcaca gacgaagaggtagacgagatgataaaagaagctgacattgacggtgacggacaggttaattatgaaggcgacacatgcat tccttggaatgattttctactttag |
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Protein
| Protein ID | pfu_aug1.0_13306.1_17980.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13306.1_17980.t1 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAKKMKDTDTEEEIREAFRV FDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADIDGDGQVNYEGDTCIPWNDFLL |
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