Gene
Gene Model ID | pfu_aug1.0_13312.1_53933 |
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Locus | scaffold13312.1 : 239 ... 14107 : - |
To GenomeBrowser | scaffold13312.1:239..14107 |
Genes list of scaffold | scaffold13312.1 |
Synonym | pfu_aug2.0_234.1_13841 |
Manual annotation
Study field | Environmental Response |
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Gene name | hypothetical protein |
Description | Similar (30%) to XP_003425068.1| PREDICTED: thyrotropin-releasing hormone receptor-like [Nasonia vitripennis |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_13312.1_53933.t1 | 1 | 1 | 7tm_1 | 67 | 334 | 6.6e-18 | 64.7 | 1.9e-21 | 9.6e-18 | 64.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_13312.1_53933.t1 | gi|345484555|ref|XP_003425068.1| | PREDICTED: growth hormone secretagogue receptor type 1 [Nasonia vitripennis] | 1.0e-26 |
Transcript
Transcript ID | pfu_aug1.0_13312.1_53933.t1 |
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Definition | - |
>pfu_aug1.0_13312.1_53933.t1 aatgctgacaatgaatccaacattgactcgtgtaattcatctcacgtctttggagtcaaccatacaaaatcattttgtga tgatggttttataggaatgtcggcaaatcacagcatcgtggagtctgagtacgagaggtcagcaggtcaaatcttctttc gttacgtcactccaatcgtcctacttatagggcttgttggaaacaccttgtcgttaagggtgtttgtcacgaagaatatg cgcaaattgtctgccagcgtctaccttgccgctctgtcaacttccgatttgattgcgcttttgttttatgtatcgataga atggatcaaacgaggccttcctcaaatattagagactgtggcgccatttaccgagcaagagggtatctgccagatcatcc agtacctccaatatgtctcccggttcctgtctgcctggctggtcgtctgttttacctttgagaggtacatcggtgtctgt catcctctcaaaaggaaggatatctgcgatatcaacacatcaagaaagatagtaatgaccgtgattatcgtttccctcat tatctgcattttcaggccggtcctgagcggaactcactatgttggaccgcgtcatgtgccatattgctccgccaggttgc aatacaaattcgtttctttcgttctagattgtatttttgtcgttacgataacatttcttccattttgtataataactgta ctgaatgctatgatcatccggaaattattcatccgtaaccggaaacatcgggaatgtaaaataataacagaagagagtat cattcgtcttgagttcactatcatcctcattgccatttcgttctgcttcattgctttcaatacaccatatatggtaatat ggttcaaactttttctatccgtagcgaacaatgtgatggttggttttgttgaaaatgaatccatgctttcttttacgcgc accataatctacatgaactactgtgtcaatttcttcttatacagtgtaacgggtgcctactttcggaaagaactgcgcat gttgttcacctacaaagccaaaccttaccaaaattaccatcggtgctctgtacataattctaactcgaacactccccaat catggttgtga |
Protein
Protein ID | pfu_aug1.0_13312.1_53933.t1 |
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Definition | - |
>pfu_aug1.0_13312.1_53933.t1 NADNESNIDSCNSSHVFGVNHTKSFCDDGFIGMSANHSIVESEYERSAGQIFFRYVTPIVLLIGLVGNTLSLRVFVTKNM RKLSASVYLAALSTSDLIALLFYVSIEWIKRGLPQILETVAPFTEQEGICQIIQYLQYVSRFLSAWLVVCFTFERYIGVC HPLKRKDICDINTSRKIVMTVIIVSLIICIFRPVLSGTHYVGPRHVPYCSARLQYKFVSFVLDCIFVVTITFLPFCIITV LNAMIIRKLFIRNRKHRECKIITEESIIRLEFTIILIAISFCFIAFNTPYMVIWFKLFLSVANNVMVGFVENESMLSFTR TIIYMNYCVNFFLYSVTGAYFRKELRMLFTYKAKPYQNYHRCSVHNSNSNTPQSWL |