Gene
| Gene Model ID | pfu_aug1.0_13312.1_53933 |
|---|---|
| Locus | scaffold13312.1 : 239 ... 14107 : - |
| To GenomeBrowser | scaffold13312.1:239..14107 |
| Genes list of scaffold | scaffold13312.1 |
| Synonym | pfu_aug2.0_234.1_13841 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | hypothetical protein |
| Description | Similar (30%) to XP_003425068.1| PREDICTED: thyrotropin-releasing hormone receptor-like [Nasonia vitripennis |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13312.1_53933.t1 | 1 | 1 | 7tm_1 | 67 | 334 | 6.6e-18 | 64.7 | 1.9e-21 | 9.6e-18 | 64.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13312.1_53933.t1 | gi|345484555|ref|XP_003425068.1| | PREDICTED: growth hormone secretagogue receptor type 1 [Nasonia vitripennis] | 1.0e-26 |
Transcript
| Transcript ID | pfu_aug1.0_13312.1_53933.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13312.1_53933.t1 aatgctgacaatgaatccaacattgactcgtgtaattcatctcacgtctttggagtcaaccatacaaaatcattttgtga tgatggttttataggaatgtcggcaaatcacagcatcgtggagtctgagtacgagaggtcagcaggtcaaatcttctttc gttacgtcactccaatcgtcctacttatagggcttgttggaaacaccttgtcgttaagggtgtttgtcacgaagaatatg cgcaaattgtctgccagcgtctaccttgccgctctgtcaacttccgatttgattgcgcttttgttttatgtatcgataga atggatcaaacgaggccttcctcaaatattagagactgtggcgccatttaccgagcaagagggtatctgccagatcatcc agtacctccaatatgtctcccggttcctgtctgcctggctggtcgtctgttttacctttgagaggtacatcggtgtctgt catcctctcaaaaggaaggatatctgcgatatcaacacatcaagaaagatagtaatgaccgtgattatcgtttccctcat tatctgcattttcaggccggtcctgagcggaactcactatgttggaccgcgtcatgtgccatattgctccgccaggttgc aatacaaattcgtttctttcgttctagattgtatttttgtcgttacgataacatttcttccattttgtataataactgta ctgaatgctatgatcatccggaaattattcatccgtaaccggaaacatcgggaatgtaaaataataacagaagagagtat cattcgtcttgagttcactatcatcctcattgccatttcgttctgcttcattgctttcaatacaccatatatggtaatat ggttcaaactttttctatccgtagcgaacaatgtgatggttggttttgttgaaaatgaatccatgctttcttttacgcgc accataatctacatgaactactgtgtcaatttcttcttatacagtgtaacgggtgcctactttcggaaagaactgcgcat gttgttcacctacaaagccaaaccttaccaaaattaccatcggtgctctgtacataattctaactcgaacactccccaat catggttgtga |
|
Protein
| Protein ID | pfu_aug1.0_13312.1_53933.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13312.1_53933.t1 NADNESNIDSCNSSHVFGVNHTKSFCDDGFIGMSANHSIVESEYERSAGQIFFRYVTPIVLLIGLVGNTLSLRVFVTKNM RKLSASVYLAALSTSDLIALLFYVSIEWIKRGLPQILETVAPFTEQEGICQIIQYLQYVSRFLSAWLVVCFTFERYIGVC HPLKRKDICDINTSRKIVMTVIIVSLIICIFRPVLSGTHYVGPRHVPYCSARLQYKFVSFVLDCIFVVTITFLPFCIITV LNAMIIRKLFIRNRKHRECKIITEESIIRLEFTIILIAISFCFIAFNTPYMVIWFKLFLSVANNVMVGFVENESMLSFTR TIIYMNYCVNFFLYSVTGAYFRKELRMLFTYKAKPYQNYHRCSVHNSNSNTPQSWL |
|