Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13318.1_61194
Locus scaffold13318.1 : 1 ... 4915 : -
To GenomeBrowser scaffold13318.1:1..4915
Genes list of scaffold scaffold13318.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_13318.1_61194.t1 1 1 G-alpha 28 111 1.6e-25 89.6 7.8e-29 1.9e-25 89.3

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_13318.1_61194.t1
Definition-
>pfu_aug1.0_13318.1_61194.t1
atgacgtgtgaccttgaccttgactttgacctacttttcaaaaactttaacctgggctatatctcttcaactataggggc
tngcaatgtgtccatcatcttgtttctcaataagtatgacttgctgaaagagaaagtgcagcgagtgagcatcaaagact
atttcccagaattccagggcgattcacacaatgtggaacatgtacaaaactttctgcacgctatgttcgaccaaagacgc
aaggacaggagcaaacccctgtttcaccacttcaccactgccatagatactgagaacatcaagtttgtgtttcaagcagt
caaggatactattctccaagaaaacctcaagtcgctgatgttgcagtga

Protein
Protein IDpfu_aug1.0_13318.1_61194.t1
Definition-
>pfu_aug1.0_13318.1_61194.t1
MTCDLDLDFDLLFKNFNLGYISSTIGAXNVSIILFLNKYDLLKEKVQRVSIKDYFPEFQGDSHNVEHVQNFLHAMFDQRR
KDRSKPLFHHFTTAIDTENIKFVFQAVKDTILQENLKSLMLQ

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