Gene
| Gene Model ID | pfu_aug1.0_13318.1_61195 |
|---|---|
| Locus | scaffold13318.1 : 6926 ... 20425 : - |
| To GenomeBrowser | scaffold13318.1:6926..20425 |
| Genes list of scaffold | scaffold13318.1 |
| Synonym | pfu_aug2.0_171.1_03746 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13318.1_61195.t1 | 2 | 1 | Aminotran_3 | 21 | 52 | 2.4e-31 | 108.8 | 2.5e-05 | 0.37 | 9.5 |
| pfu_aug1.0_13318.1_61195.t1 | 2 | 2 | Aminotran_3 | 91 | 199 | 2.4e-31 | 108.8 | 6.5e-32 | 9.6e-28 | 97.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13318.1_61195.t1 | gi|321473707|gb|EFX84674.1| | hypothetical protein DAPPUDRAFT_209533 [Daphnia pulex] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| >Adult tissues | |
| mantle | 2 |
| mantleEdge | 2 |
| pearlSac | 2 |
Transcript
| Transcript ID | pfu_aug1.0_13318.1_61195.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13318.1_61195.t1 atgtcgaagcattttcagtgggcccatcgacttcgagataacgagtgtcagctgtatatacatatagcagcatttatcag tgaagctctgatgagcctttgtggggtggtgagtccacctgaccagtaccttaaacttgtgtacaggttaagtaaaattg gacaggtccattcctgccttactttaagtcctacatcaaccaaacttgtgtggatgatgcatctgaggatgcttaaagca atgcatggtacagatgctgcatctgacccacatttcacattcgagcaatcagatgtggtgccggacataattacagtagg gaaacctctaggaaatgggtatccgatggccctggtggttaccaagaaagaaatagccgactcagtgatggaattcaata gtactttcggagggaatcctgtagcatgtgccgtggggatggctgttttagatgttattaagaatgagaagttgatgtcg agtgccaaaagtgttgggaggtgccttattgatggcttcaaagctatcgcacagaaacatgataatataggagatgtaag gggaatgggaatgtgtgttggtgttgacattgtgaaagaaaaaggtagcagaaaaccagcaaaagaagttgctgaaatat tggcgtacaaattgaaagaacaaaaaataatcgtagccaatgaaggaccagaaaagaatgtgatgttgatcttaccacca atgtgttttacatgtgacaatgctcgctgtgtggtacaagcttttgacactgccctcacagagatagaactcggaagttc atcggacggagttggcgttaaagatgagcaacgaataagtgttcccctcaatattctgactgctccaccaggattactgg atgaggactcatcggatgaagacggcccagcagccaaacaggccaaatacgaggagatggattga |
|
Protein
| Protein ID | pfu_aug1.0_13318.1_61195.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13318.1_61195.t1 MSKHFQWAHRLRDNECQLYIHIAAFISEALMSLCGVVSPPDQYLKLVYRLSKIGQVHSCLTLSPTSTKLVWMMHLRMLKA MHGTDAASDPHFTFEQSDVVPDIITVGKPLGNGYPMALVVTKKEIADSVMEFNSTFGGNPVACAVGMAVLDVIKNEKLMS SAKSVGRCLIDGFKAIAQKHDNIGDVRGMGMCVGVDIVKEKGSRKPAKEVAEILAYKLKEQKIIVANEGPEKNVMLILPP MCFTCDNARCVVQAFDTALTEIELGSSSDGVGVKDEQRISVPLNILTAPPGLLDEDSSDEDGPAAKQAKYEEMD |
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