Gene
| Gene Model ID | pfu_aug1.0_1333.1_36959 |
|---|---|
| Locus | scaffold1333.1 : 48109 ... 56735 : - |
| To GenomeBrowser | scaffold1333.1:48109..56735 |
| Genes list of scaffold | scaffold1333.1 |
| Synonym | pfu_aug2.0_108.1_26866 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1333.1_36959.t1 | 3 | 1 | cNMP_binding | 65 | 184 | 1.6e-26 | 91.9 | 1.1e-19 | 1.7e-15 | 56.5 |
| pfu_aug1.0_1333.1_36959.t1 | 3 | 2 | cNMP_binding | 228 | 252 | 1.6e-26 | 91.9 | 8.1e-07 | 0.012 | 15.4 |
| pfu_aug1.0_1333.1_36959.t1 | 3 | 3 | cNMP_binding | 327 | 390 | 1.6e-26 | 91.9 | 5.6e-07 | 0.0083 | 15.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1333.1_36959.t1 | gi|353231228|emb|CCD77646.1| | putative camp-dependent protein kinase regulatory chain [Schistosoma mansoni] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1333.1_36959.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1333.1_36959.t1 atggcgtctccggacgttgccgcacatttctatgatcacgtcgttaaactcctgagtaaagaaccacaggacagagggga tgtggaaatagaccaaatattggcgtggttccggaaaaagtcggacttgttcaaaacattgaaaaaggaaatcattgctg accttatcaagaattgcgagtttgagacggacgagaaagatgacgtcatcattcagcaaggtgataaaggtgactgtttc ttcataattctgagtggatctgttgctattcacatcaatactacatatggtatagaagatgatactaacgacgataaaga agatgacggatcaaggacgtcacggagagatgacagtgcaagtacaacgagtgaaagaaaacatctggatagatctaaat tcggcaactatgtcggcaaaatagaagcagggaaaagttttggcgagcttgctcttataaatgcagattgtgttcgtaat gctactatcatagcgaacgaacggacagatctcgtggtggtgaacagagaactttacaatcgttcactcaaagctttcca agagaaagacttcgaggaaagaaagaaatttgtggaaacgaatgaactgtttacgaactggcaacataaatacaaaaagc aaatggccatgagtttacggaaggagaaaatgtactttgatagtgtgattgttagacagggaacgccggtagatggaatt attttcttacttagtggccaagtaaagttattaacggaccccacactccatgaagtacagtatccagagtacttcccctt ggctgaccctgatgacctagagaaggaggaagcaagagaatccctacgcagagagttgagtatgctttccccaaattttg agcataggaagtcccccgagaagagacagaccacgcctcattctaccatgtcatcccctcactcctctgtcatctctcct tacgtcctatccccgagccaagacggtaaaagtagaaacagaacaccacataggagtgctatagaagtctgtaacctcgg agctcaggaagtcttaggtgatctcgaagctgtacttgacttgccaacttactcctacacaataatctgtagtcaagaag cagaattttatgttctggatcagaaaaactacgacagactgatagagaaaagaaatcctaaagtaatagagatgctgaag aaggcggtacaacaaaaatacagtatcagactgtcatgggtccaggataaccaaataccactgttacgatatttcttata taaaatagaagaggaactgaaatctcggagtcagaaatcaagtgtcataaaactgcaaagcagagaaaacacaagtgaat ggagtgtgactaatctagctaaaggaccactcattgacatgtttggtccagggagtgtgttttatactatacgcatgaag gacaaacagagacatagagaacgggacaagtataatgtagatcataggagaatacacacgagatctcacgtgccaccccg cgtcactggcccggcacccacgctcaccagtcagaggacgtttgtgacacagactggtctgactgctgagggtgaggagg aggacagagaaagcctacatagcggggaagagggggagggatatgacgtcactgataaggaacaccccaagttgatatgt gaacactcccgtagtacgatggctaactgtgtgagtacagaggaggtatcggaggagacccgcgataaggaggtcaacga aggtgctttacaggtgctggagagtaaaatagaggcgtggcataaaagtttaggggaggatcctcatagaagacaggcta aacgaacagtcaaactacatagaatgaatgagaccaatgtaccgccacatccgggtaagacgatctatatccgccccaga cagcgtaggaagattgacgtcatagctaatataaaggcctctaacacggaggagtctataccgtctatgttcagagttca gtcgccgaaaaaagactcgaatgtaaccctcagtgtcgtgcaatcaacgaggccgagttataaaggctcatcctcagaaa taacaagaagtcccagaagcgagcgtcacaggcccctatcctctagaccatggatagtaccatcttatgtcaaaaagaaa aggccatcatctgcaagacagtacactgcgcaagaatacgaagctctgaaagaggaacttcgccggaaacagaaagcgtt caagtcactactcagtcggccctcgaactcatatttctga |
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Protein
| Protein ID | pfu_aug1.0_1333.1_36959.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1333.1_36959.t1 MASPDVAAHFYDHVVKLLSKEPQDRGDVEIDQILAWFRKKSDLFKTLKKEIIADLIKNCEFETDEKDDVIIQQGDKGDCF FIILSGSVAIHINTTYGIEDDTNDDKEDDGSRTSRRDDSASTTSERKHLDRSKFGNYVGKIEAGKSFGELALINADCVRN ATIIANERTDLVVVNRELYNRSLKAFQEKDFEERKKFVETNELFTNWQHKYKKQMAMSLRKEKMYFDSVIVRQGTPVDGI IFLLSGQVKLLTDPTLHEVQYPEYFPLADPDDLEKEEARESLRRELSMLSPNFEHRKSPEKRQTTPHSTMSSPHSSVISP YVLSPSQDGKSRNRTPHRSAIEVCNLGAQEVLGDLEAVLDLPTYSYTIICSQEAEFYVLDQKNYDRLIEKRNPKVIEMLK KAVQQKYSIRLSWVQDNQIPLLRYFLYKIEEELKSRSQKSSVIKLQSRENTSEWSVTNLAKGPLIDMFGPGSVFYTIRMK DKQRHRERDKYNVDHRRIHTRSHVPPRVTGPAPTLTSQRTFVTQTGLTAEGEEEDRESLHSGEEGEGYDVTDKEHPKLIC EHSRSTMANCVSTEEVSEETRDKEVNEGALQVLESKIEAWHKSLGEDPHRRQAKRTVKLHRMNETNVPPHPGKTIYIRPR QRRKIDVIANIKASNTEESIPSMFRVQSPKKDSNVTLSVVQSTRPSYKGSSSEITRSPRSERHRPLSSRPWIVPSYVKKK RPSSARQYTAQEYEALKEELRRKQKAFKSLLSRPSNSYF |
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