Gene
| Gene Model ID | pfu_aug1.0_13336.1_10593 |
|---|---|
| Locus | scaffold13336.1 : 7096 ... 14091 : + |
| To GenomeBrowser | scaffold13336.1:7096..14091 |
| Genes list of scaffold | scaffold13336.1 |
| Synonym | pfu_aug2.0_860.1_01202 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13336.1_10593.t1 | 2 | 1 | Galactosyl_T | 33 | 59 | 1.7e-33 | 115.8 | 0.056 | 820.0 | -0.6 |
| pfu_aug1.0_13336.1_10593.t1 | 2 | 2 | Galactosyl_T | 92 | 267 | 1.7e-33 | 115.8 | 4.6e-37 | 6.9e-33 | 113.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13336.1_10593.t1 | gi|340723682|ref|XP_003400218.1| | 3.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_13336.1_10593.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13336.1_10593.t1 atgcgatgtgacagattcaagataagaatcaagggtcctctagacatccgtaagatccgcctggtttctattgttatatt actggtgataacatggacatatcttttcactgtgaacataacacaaactctaacacagagacaagttcgaaggacacact acaataatgatgaaattaccttcaatataaatgagaaaagtatttgtgatggaagcaggaatagtgatttagaaattctt gttgccatagtttcgagttttgatgaatactggcagagagattacatccgggcaacatggggaaacgatgccaagaaaag tccgaaaatgaggatattgtttatcgtggggacttctgttgaggacagccctgataccccctccatccaggaagaaagtt ataaatttggagatatcgttcaagtaaactttactgatacacttcagaatatacctttaaaaactatagctcttatgaaa tggataagcaaatattgtggaaatgccaaatatgtgctaaaaatcgattcggacatgaaaacagatttaaatttattatt ggatatgttacaacaattcgttataccagatacattcttatgtggaaaaattatagatgatttcaagttaaataatgaac aggataacttaaatttgttacgcaaaggaacagtatttccgccatattgccataaatcagcctatatagtgtcccagaga atcgtccataaactagtctcacagccgatatctcttcctcccctggtagaactggatgacatgtatatcacaggattact cagaaccagaa |
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Protein
| Protein ID | pfu_aug1.0_13336.1_10593.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13336.1_10593.t1 MRCDRFKIRIKGPLDIRKIRLVSIVILLVITWTYLFTVNITQTLTQRQVRRTHYNNDEITFNINEKSICDGSRNSDLEIL VAIVSSFDEYWQRDYIRATWGNDAKKSPKMRILFIVGTSVEDSPDTPSIQEESYKFGDIVQVNFTDTLQNIPLKTIALMK WISKYCGNAKYVLKIDSDMKTDLNLLLDMLQQFVIPDTFLCGKIIDDFKLNNEQDNLNLLRKGTVFPPYCHKSAYIVSQR IVHKLVSQPISLPPLVELDDMYITGLLRTR |
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