Gene
| Gene Model ID | pfu_aug1.0_1343.1_36965 |
|---|---|
| Locus | scaffold1343.1 : 14307 ... 20005 : - |
| To GenomeBrowser | scaffold1343.1:14307..20005 |
| Genes list of scaffold | scaffold1343.1 |
| Synonym | pfu_aug2.0_4697.1_25975 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1343.1_36965.t1 | 1 | 1 | EF-hand_7 | 52 | 112 | 4.6e-11 | 42.6 | 2.8e-14 | 4.6e-11 | 42.6 |
| pfu_aug1.0_1343.1_36965.t1 | 2 | 1 | EF-hand_6 | 52 | 80 | 1.2e-08 | 34.1 | 4.9e-08 | 8.1e-05 | 22.1 |
| pfu_aug1.0_1343.1_36965.t1 | 2 | 1 | EF-hand_1 | 53 | 79 | 4.5e-13 | 47.4 | 6.5e-09 | 1.1e-05 | 24.4 |
| pfu_aug1.0_1343.1_36965.t1 | 2 | 1 | EF-hand_8 | 56 | 78 | 3.4e-09 | 36.1 | 2.8e-05 | 0.046 | 13.3 |
| pfu_aug1.0_1343.1_36965.t1 | 2 | 2 | EF-hand_8 | 71 | 114 | 3.4e-09 | 36.1 | 1.1e-10 | 1.9e-07 | 30.5 |
| pfu_aug1.0_1343.1_36965.t1 | 2 | 2 | EF-hand_1 | 87 | 112 | 4.5e-13 | 47.4 | 1.5e-08 | 2.4e-05 | 23.3 |
| pfu_aug1.0_1343.1_36965.t1 | 2 | 2 | EF-hand_6 | 88 | 112 | 1.2e-08 | 34.1 | 0.00057 | 0.94 | 9.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1343.1_36965.t1 | gi|14041708|emb|CAC38780.1| | allograft inflammatory factor 1 [Suberites domuncula] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1343.1_36965.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1343.1_36965.t1 atgcctgtagattttacagataaacaaggagggaagaaatatggacagctgcggaaggaacaagaagccatactagatga tatcaatcagacatttgcagacgacaaagactatgtggaggaatatgaagacttagcagataggttgcagagatataaag aacaatttatggaattcgacgaagacaattctggtgatattgacataatggaattaaagaggatgatggagaaactaggt caagctaagacccacctggaactgaagaagatgatagcggaagtagataccaccgactcgggtactattcattataacga gttcgtaggaatgatgttaggaaagaaatcttccgttctaaaattgatattaatgttcgaagaaaagaagaaagagaagg aaaagccaaaaggagttgctcctaaaaagagcttatctgatttgccttga |
|
Protein
| Protein ID | pfu_aug1.0_1343.1_36965.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1343.1_36965.t1 MPVDFTDKQGGKKYGQLRKEQEAILDDINQTFADDKDYVEEYEDLADRLQRYKEQFMEFDEDNSGDIDIMELKRMMEKLG QAKTHLELKKMIAEVDTTDSGTIHYNEFVGMMLGKKSSVLKLILMFEEKKKEKEKPKGVAPKKSLSDLP |
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