Gene
| Gene Model ID | pfu_aug1.0_1343.1_36967 |
|---|---|
| Locus | scaffold1343.1 : 30711 ... 38115 : - |
| To GenomeBrowser | scaffold1343.1:30711..38115 |
| Genes list of scaffold | scaffold1343.1 |
| Synonym | pfu_aug2.0_44.1_13469 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1343.1_36967.t1 | 1 | 1 | Glycohydro_20b2 | 99 | 233 | 6.1e-21 | 75.4 | 4.0e-24 | 1.2e-20 | 74.4 |
| pfu_aug1.0_1343.1_36967.t1 | 1 | 1 | Glyco_hydro_20 | 254 | 422 | 0.0 | 193.8 | 0.0 | 0.0 | 191.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1343.1_36967.t1 | gi|157108038|ref|XP_001650050.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1343.1_36967.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1343.1_36967.t1 atgtgttgtttttgcacttccggaagaaagaagcaaattgttcgccataataaaatggacgacgatatgaaaattgtgga aatgcatgcatctaataaagaagaagtggagaaaaataaaaaggttgccaaaatggtcgccgaacaagaaagaaaaaaac caaagcggaaattaattcgaccaacgatgtcttctgtcgacatcggttgggactacagcgattttgctatgaaattcgca gaggatagaatgaaactgaaaataaggcgtaggccgactgcaacagttgggaaaccctggcccctaccgcaagaatatag cacaggcgataaactgtttaaaattgatctcaaacaattttcgatagacgccagtaaagtttggtgtgaaataatcgaga aagcaatagacaggtatcgaaaaatactttatatggcagcagggcagtttgcaagtgataatatggaaccgcttggtaaa ttcggactacatggcgtgatggaagagaatattacgagaaagattgaggaggccatggaaatgaaatttcttactatatc tatagacacaaattgttcatacatcccggacatatcatctgatgaatcgtataccttactagtcaagccaattggggcat ttatcaaagcaaacgaagtttggggtgccttacggggtttagagacctttagccagttgattatccataaaggtggacag tactatatcccagagacgacaatacttgattttccacgttttccccacagaggtgttcttatagactcatcccgtcacta catgagcaaaaacgtgatatttgatgtcatggatgggatggtgatgaataagatgaacgtattccattggcacattgtgg atgaccagtcctttccttaccaaagtcaagtcttcccagaattaagcgccaagggagcgtatcacccgctgttgatttat actttcgacgacataagagaagtgatagaatacggacgactccgtggaataagggtgattcctgaatttgacacgccagg acatacattttcctggggttttagccaccccgagctacttactcagtgttataagtctcaacatccaataccaggatacc tgggtcctatggaccccagtaaggcttccacatacgaattccttgcccagttcttcaaagaggctatccagctattccca gatgattttttacacctaggaggcgatgaagtacctatagagtgttggctctcgaaaaatgttactgacattggtgcgga catgaatcgaaatctgcaacttataatgtgggaagaagtgttcaaaaataatctaaatgtacgtattagtcattggagtc gattttga |
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Protein
| Protein ID | pfu_aug1.0_1343.1_36967.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1343.1_36967.t1 MCCFCTSGRKKQIVRHNKMDDDMKIVEMHASNKEEVEKNKKVAKMVAEQERKKPKRKLIRPTMSSVDIGWDYSDFAMKFA EDRMKLKIRRRPTATVGKPWPLPQEYSTGDKLFKIDLKQFSIDASKVWCEIIEKAIDRYRKILYMAAGQFASDNMEPLGK FGLHGVMEENITRKIEEAMEMKFLTISIDTNCSYIPDISSDESYTLLVKPIGAFIKANEVWGALRGLETFSQLIIHKGGQ YYIPETTILDFPRFPHRGVLIDSSRHYMSKNVIFDVMDGMVMNKMNVFHWHIVDDQSFPYQSQVFPELSAKGAYHPLLIY TFDDIREVIEYGRLRGIRVIPEFDTPGHTFSWGFSHPELLTQCYKSQHPIPGYLGPMDPSKASTYEFLAQFFKEAIQLFP DDFLHLGGDEVPIECWLSKNVTDIGADMNRNLQLIMWEEVFKNNLNVRISHWSRF |
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