Gene
| Gene Model ID | pfu_aug1.0_13445.1_39493 |
|---|---|
| Locus | scaffold13445.1 : 1 ... 8961 : + |
| To GenomeBrowser | scaffold13445.1:1..8961 |
| Genes list of scaffold | scaffold13445.1 |
| Synonym | pfu_aug2.0_1404.1_15019 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13445.1_39493.t1 | 1 | 1 | NACHT | 139 | 249 | 9.7e-09 | 35.0 | 1.5e-11 | 1.1e-07 | 31.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 5 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 2 |
| maleGonad | 2 |
| mantle | 3 |
| mantleEdge | 2 |
| mantlePallium | 2 |
| pearlSac | 2 |
Transcript
| Transcript ID | pfu_aug1.0_13445.1_39493.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13445.1_39493.t1 atgaagatgcaggtgtgacgaaaatgaaggaacggctaatggaaatcaatgacaagttaacccggttcatcaaactttcc cctctacaggacacagaagaggaattacctatagagctgttatatgcctcagtggtcatctgtgaagatcagaaatatat tacgaagggcagtgaatcaaaacaagacatggaagagtttaccggacattgggaacatagacatgcaggtacttcagact tcgatataggaagttataaatatgagatgtcccgtgtgagtgaagtcaaaggctcggatgactcgagctctgacaattat tttgaactatttagttctatctttgggaggcctaggattagggaagtcacaaacccagatgacatttttcaaaaagatgg taaatacgtcaggaaaatatacatgttaggggacgcggcacacggtaaaaccacttactgtgtatggctattatgcaaat ggtgcaacgctaaaagaaaggaaagaaccggacagaaaaattttgataagtgggaacaagaactgaggaaatttgacttt gtttttctgatgaagtttcgcaatgttaacgatctaaatctagtttcagttgtagatatgatctgccaggacgcgtttga gagttataaagactgccatgatgccatacgtcacgtattatcatcggatgaatataaaagtcttatcatcttggatggac tagatgaattgaactcgaacagtgaaaataggataccaaggattgatgtgtcagaatcattccatatctgtacacagtgt gtgtttctgacttcatataaattttctgagaactacagaaattga |
|
Protein
| Protein ID | pfu_aug1.0_13445.1_39493.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13445.1_39493.t1 EDAGVTKMKERLMEINDKLTRFIKLSPLQDTEEELPIELLYASVVICEDQKYITKGSESKQDMEEFTGHWEHRHAGTSDF DIGSYKYEMSRVSEVKGSDDSSSDNYFELFSSIFGRPRIREVTNPDDIFQKDGKYVRKIYMLGDAAHGKTTYCVWLLCKW CNAKRKERTGQKNFDKWEQELRKFDFVFLMKFRNVNDLNLVSVVDMICQDAFESYKDCHDAIRHVLSSDEYKSLIILDGL DELNSNSENRIPRIDVSESFHICTQCVFLTSYKFSENYRN |
|