Gene
| Gene Model ID | pfu_aug1.0_1348.1_07915 |
|---|---|
| Locus | scaffold1348.1 : 13317 ... 26395 : - |
| To GenomeBrowser | scaffold1348.1:13317..26395 |
| Genes list of scaffold | scaffold1348.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1348.1_07915.t1 | 1 | 1 | RRN3 | 2 | 109 | 6.5e-09 | 34.4 | 9.5e-13 | 7.0e-09 | 34.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 6 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| maleGonad | 6 |
| mantleEdge | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1348.1_07915.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1348.1_07915.t1 atgccgttgttgacagacctctacccacacatgacaaaggatgtatactaccacgagtgctacgtcagaaatctactaca gaccacatattacataccctcactacgtcagaaaatatgccgcctcgtagtagacggaatgctgacttttgatgtaagta ttcatgtggtgacctacaaatggattaatagaatcgagcaccactttcagttccggatagaagaatatcagttgaaggtg agatgtcctcgacatgagatagaggaagcagaggataatgacgaggaggaggaggacatggaacaggaggtattgtttga gatgacgaatttatattttagagacccttggatgacgaatttacgtactgacgaaatggtcattttgaacaaattgacga aaattggtactgacgaaaataaagcaatttatagtattatgtttgagtccctgacccccagggtcatagaaatgggtgtg gtcattttctcctacataactctatgtaatcttgtgctcgcaactcctctgacgctataa |
|
Protein
| Protein ID | pfu_aug1.0_1348.1_07915.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1348.1_07915.t1 MPLLTDLYPHMTKDVYYHECYVRNLLQTTYYIPSLRQKICRLVVDGMLTFDVSIHVVTYKWINRIEHHFQFRIEEYQLKV RCPRHEIEEAEDNDEEEEDMEQEVLFEMTNLYFRDPWMTNLRTDEMVILNKLTKIGTDENKAIYSIMFESLTPRVIEMGV VIFSYITLCNLVLATPLTL |
|