Gene
| Gene Model ID | pfu_aug1.0_1350.1_15441 |
|---|---|
| Locus | scaffold1350.1 : 89270 ... 107225 : - |
| To GenomeBrowser | scaffold1350.1:89270..107225 |
| Genes list of scaffold | scaffold1350.1 |
| Synonym | pfu_aug2.0_264.1_13899 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1350.1_15441.t1 | 2 | 1 | Ank_5 | 2 | 31 | 1.7e-11 | 43.9 | 1.3e-05 | 0.04 | 14.1 |
| pfu_aug1.0_1350.1_15441.t1 | 2 | 1 | Ank_4 | 2 | 53 | 1.6e-19 | 69.8 | 4.9e-16 | 1.5e-12 | 47.6 |
| pfu_aug1.0_1350.1_15441.t1 | 2 | 1 | Ank_3 | 3 | 29 | 2.6e-12 | 45.7 | 1.8e-06 | 0.0053 | 16.8 |
| pfu_aug1.0_1350.1_15441.t1 | 2 | 1 | Ank | 3 | 30 | 6.7e-18 | 63.5 | 2.8e-07 | 0.00085 | 19.0 |
| pfu_aug1.0_1350.1_15441.t1 | 1 | 1 | Ank_2 | 3 | 64 | 2.7e-14 | 53.2 | 2.1e-17 | 6.1e-14 | 52.1 |
| pfu_aug1.0_1350.1_15441.t1 | 2 | 2 | Ank_5 | 31 | 68 | 1.7e-11 | 43.9 | 3.9e-10 | 1.2e-06 | 28.5 |
| pfu_aug1.0_1350.1_15441.t1 | 2 | 2 | Ank_3 | 33 | 61 | 2.6e-12 | 45.7 | 1.9e-09 | 5.6e-06 | 26.1 |
| pfu_aug1.0_1350.1_15441.t1 | 2 | 2 | Ank_4 | 33 | 67 | 1.6e-19 | 69.8 | 1.4e-09 | 4.2e-06 | 27.1 |
| pfu_aug1.0_1350.1_15441.t1 | 2 | 2 | Ank | 33 | 64 | 6.7e-18 | 63.5 | 1.6e-14 | 4.8e-11 | 41.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1350.1_15441.t1 | gi|348542296|ref|XP_003458621.1| | 2.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1350.1_15441.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1350.1_15441.t1 atgactactgcattacattgggcagcgaagcacggtaaaccagaagttatcaagcttgtagctagtaaacctggaatcag cgtcaataaaagatcgggttatacccctttacatatagctgccatacatggacatgaagaaattatagaattattagtac aaacatacaaggctgatccaaacctgcgagactacagtgggaaaaaagccaaacagtatctcagaaacaacgcatcaacg aaagcccaacaattacttctgtcaagaaaactaggatcttcagttgtgtcagggaggtcacttgatgattcctttacccg cagttcatctttccgacgtagtaagcaggtcaaggccattagcagccttatccagggtacttcctcaggagtcaaggcca tgttcaggtcaacgtgggcggggtcagcggaggaacttaacaggcttacaggtggccattccaatggcagacacaccata tcacgaagtccaagtgctacaccacagggaagtgctggtccctccccaaatgtcaggaggagagaaacagtttcaaaaga ccgagagttaatgccccctccatcagctcccgtaagacgacacaagatggcgcatcattcttcaagtagagaaaatgtca acagtgaagaaatgcaaaggtaa |
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Protein
| Protein ID | pfu_aug1.0_1350.1_15441.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1350.1_15441.t1 MTTALHWAAKHGKPEVIKLVASKPGISVNKRSGYTPLHIAAIHGHEEIIELLVQTYKADPNLRDYSGKKAKQYLRNNAST KAQQLLLSRKLGSSVVSGRSLDDSFTRSSSFRRSKQVKAISSLIQGTSSGVKAMFRSTWAGSAEELNRLTGGHSNGRHTI SRSPSATPQGSAGPSPNVRRRETVSKDRELMPPPSAPVRRHKMAHHSSSRENVNSEEMQR |
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