Gene
| Gene Model ID | pfu_aug1.0_13522.1_61223 |
|---|---|
| Locus | scaffold13522.1 : 8646 ... 30305 : + |
| To GenomeBrowser | scaffold13522.1:8646..30305 |
| Genes list of scaffold | scaffold13522.1 |
| Synonym | pfu_aug2.0_366.1_20664 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13522.1_61223.t1 | 1 | 1 | BP28CT | 9 | 130 | 2.6e-36 | 124.6 | 1.0e-39 | 3.8e-36 | 124.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13522.1_61223.t1 | gi|260818051|ref|XP_002603898.1| | hypothetical protein BRAFLDRAFT_129998 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13522.1_61223.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13522.1_61223.t1 atgtatagaaaacaagttcccatacctcagatatctgacgttgaggagacagtgctaagtacatttgtttctctggtaat gaagctatcagaggcaacgtttagaccaatcctattcaagttatttgattgggcaacacgtgatgacagtacaagacaca gagtccttgttttctacagacttgcaaacagattgtccgagaagttgcggagtcttttcaccatatttgctgggcatatc attcaacatgctgcccaaacactagatactcacaacatatctaaaaaagataaaacaccttttggaaaagccaagttgtt gaccaatcagcttttgcagtacataatggactgtctatatcactgtttcctgtatgacactgaaggatttgtcaataagg aaagatttgacaccctcatgcagccattggttgatcagatagagaatttggacaaaccaaagttttaccaatcccgtgta gttgaccatttggtgccatgtatcatacagtttgctgtagcagctcaggatgattctctgtggaaagccatgaattacca aatactactgaaaaccagacacaattctcctaaagtatttgacgacccagtgggctatggttttgtggtccgaggtgaag gtccagcatacatccaaaccattgatccatcaggaccagcggcggctgcaggtctgaaggttcgccagtacgtgtattct gtcaacggtgagaatgttttacgtagggaccaccgatcggtcgccaggctgatcatgcgcagttcaccttatgtcaacat ttgcgtcatgactcataaacgagatgcagattga |
|
Protein
| Protein ID | pfu_aug1.0_13522.1_61223.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13522.1_61223.t1 MYRKQVPIPQISDVEETVLSTFVSLVMKLSEATFRPILFKLFDWATRDDSTRHRVLVFYRLANRLSEKLRSLFTIFAGHI IQHAAQTLDTHNISKKDKTPFGKAKLLTNQLLQYIMDCLYHCFLYDTEGFVNKERFDTLMQPLVDQIENLDKPKFYQSRV VDHLVPCIIQFAVAAQDDSLWKAMNYQILLKTRHNSPKVFDDPVGYGFVVRGEGPAYIQTIDPSGPAAAAGLKVRQYVYS VNGENVLRRDHRSVARLIMRSSPYVNICVMTHKRDAD |
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