Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13524.1_61225
Locus scaffold13524.1 : 3566 ... 13466 : +
To GenomeBrowser scaffold13524.1:3566..13466
Genes list of scaffold scaffold13524.1
Synonym pfu_aug2.0_853.1_11248

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_13524.1_61225.t1 1 1 DUF229 54 273 0.0 158.8 0.0 0.0 158.5

Transcript
Transcript IDpfu_aug1.0_13524.1_61225.t1
Definition-
>pfu_aug1.0_13524.1_61225.t1
atgacagagggcgctgtatgtttttgcgccaatcgtgcacataataaagaaccctgtgtgatacccaatattgacccctt
cgatccgtccatcttgaagtttgtgtcacacccagaccccatcgtgtgtgagaagaacccagagttttctttcattaacg
aaagtggttatttacatataaatcacacgacatccaaacaatttgggctacagacattacattgtagttacagtactgtc
aatcgtaaaggcgattttgatatagaatactcagcggaagtgacgtttgattcgccattatacataccttcagacattgt
tcgtgttcgatgcaacgacgaaaaggatcgtcttatttacgaccacatccatatacacgtggattacaaaaccgtcatga
agaacagaaatctgaaagatgagtctagtgaccaacttagcgtacatatatttggcttagattcagtgtcaaggttaaat
gctgaacggaagttaatgaagacaatgaaatatattagagaggaacttcaaggttatgtatttgaaggtcacacgaaagt
cggggagaacacatacccgtgtattgtgccgatgttaatgaatagaaaagcgtactcgaaagaaatggagaaagaacaac
atgtatggaaaacgctggataactatccctttctgtggcgtaatttctctgacgccggatacgttacgtatttttctgaa
gattcgcctcagatgtctgctttcatgggttttgataagccgccgtgtgatcactatatcagaccattttttcttgcttt
gaggaagattcggtcgtataaagttcatgatatttttctctttttggaagctcagaggataaagttaaccacgtcgtcaa
ccatgtgttacggcaacaaggccaaacagcaactagttatagaaacggaagccaacggacgaatagcgtactcaataaaa
cagactaaggcgtccgttacgtttacgttacgtatccgttctgtccgttacatctcctgtaaccgttcgacttccggtac
tcgttccggcagtgttgattctttacaaatgaacgaacaacgggctaaggagttcggcagcttttttcatccgatagaca
tccgtttgcgcaatccggtgaggtatgacaccaccattcttcgcagcatagttgctgggggttatagtaacgccaccgtc
cgtatgttagtgtgtgcgtcatgttaa

Protein
Protein IDpfu_aug1.0_13524.1_61225.t1
Definition-
>pfu_aug1.0_13524.1_61225.t1
MTEGAVCFCANRAHNKEPCVIPNIDPFDPSILKFVSHPDPIVCEKNPEFSFINESGYLHINHTTSKQFGLQTLHCSYSTV
NRKGDFDIEYSAEVTFDSPLYIPSDIVRVRCNDEKDRLIYDHIHIHVDYKTVMKNRNLKDESSDQLSVHIFGLDSVSRLN
AERKLMKTMKYIREELQGYVFEGHTKVGENTYPCIVPMLMNRKAYSKEMEKEQHVWKTLDNYPFLWRNFSDAGYVTYFSE
DSPQMSAFMGFDKPPCDHYIRPFFLALRKIRSYKVHDIFLFLEAQRIKLTTSSTMCYGNKAKQQLVIETEANGRIAYSIK
QTKASVTFTLRIRSVRYISCNRSTSGTRSGSVDSLQMNEQRAKEFGSFFHPIDIRLRNPVRYDTTILRSIVAGGYSNATV
RMLVCASC

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495