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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1353.1_58443
Locus scaffold1353.1 : 9789 ... 26395 : -
To GenomeBrowser scaffold1353.1:9789..26395
Genes list of scaffold scaffold1353.1
Synonym pfu_aug2.0_4890.1_02673

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1353.1_58443.t1 2 1 Death 7 49 2.2e-08 33.7 6.6e-06 0.011 15.5
pfu_aug1.0_1353.1_58443.t1 2 2 Death 166 229 2.2e-08 33.7 6.5e-06 0.011 15.5
pfu_aug1.0_1353.1_58443.t1 3 1 Ank_2 712 816 0.0 163.6 7.0e-17 1.1e-13 51.2
pfu_aug1.0_1353.1_58443.t1 5 1 Ank_4 744 772 1.4e-35 120.9 1.7e-07 0.00028 21.3
pfu_aug1.0_1353.1_58443.t1 6 1 Ank 746 773 0.0 153.1 2.9e-08 4.8e-05 22.9
pfu_aug1.0_1353.1_58443.t1 6 1 Ank_3 746 770 4.8e-32 106.7 6.2e-07 0.001 19.0
pfu_aug1.0_1353.1_58443.t1 5 1 Ank_5 746 773 9.6e-31 105.1 7.3e-06 0.012 15.8
pfu_aug1.0_1353.1_58443.t1 5 2 Ank_5 778 828 9.6e-31 105.1 4.5e-07 0.00074 19.6
pfu_aug1.0_1353.1_58443.t1 6 2 Ank 789 817 0.0 153.1 1.6e-08 2.6e-05 23.7
pfu_aug1.0_1353.1_58443.t1 5 2 Ank_4 790 841 1.4e-35 120.9 2.0e-10 3.3e-07 30.6
pfu_aug1.0_1353.1_58443.t1 6 2 Ank_3 790 815 4.8e-32 106.7 6.7e-07 0.0011 18.9
pfu_aug1.0_1353.1_58443.t1 3 2 Ank_2 793 884 0.0 163.6 1.4e-21 2.4e-18 66.2
pfu_aug1.0_1353.1_58443.t1 5 3 Ank_5 812 861 9.6e-31 105.1 2.0e-07 0.00034 20.7
pfu_aug1.0_1353.1_58443.t1 6 3 Ank 820 849 0.0 153.1 1.0e-07 0.00017 21.2
pfu_aug1.0_1353.1_58443.t1 6 3 Ank_3 821 849 4.8e-32 106.7 9.2e-06 0.015 15.4
pfu_aug1.0_1353.1_58443.t1 5 3 Ank_4 824 873 1.4e-35 120.9 1.7e-09 2.8e-06 27.6
pfu_aug1.0_1353.1_58443.t1 6 4 Ank 853 884 0.0 153.1 7.2e-07 0.0012 18.5
pfu_aug1.0_1353.1_58443.t1 6 4 Ank_3 853 880 4.8e-32 106.7 0.0039 6.4 7.3
pfu_aug1.0_1353.1_58443.t1 5 4 Ank_4 854 909 1.4e-35 120.9 3.6e-09 5.9e-06 26.6
pfu_aug1.0_1353.1_58443.t1 5 4 Ank_5 880 922 9.6e-31 105.1 8.2e-08 0.00013 22.0
pfu_aug1.0_1353.1_58443.t1 3 3 Ank_2 888 950 0.0 163.6 1.0e-19 1.7e-16 60.3
pfu_aug1.0_1353.1_58443.t1 6 5 Ank 889 919 0.0 153.1 1.6e-10 2.6e-07 30.1
pfu_aug1.0_1353.1_58443.t1 6 5 Ank_3 889 916 4.8e-32 106.7 1.4e-06 0.0023 17.9
pfu_aug1.0_1353.1_58443.t1 5 5 Ank_4 890 942 1.4e-35 120.9 3.3e-15 5.4e-12 45.8
pfu_aug1.0_1353.1_58443.t1 5 5 Ank_5 908 958 9.6e-31 105.1 1.7e-14 2.8e-11 43.2
pfu_aug1.0_1353.1_58443.t1 6 6 Ank 922 953 0.0 153.1 3.1e-10 5.1e-07 29.1
pfu_aug1.0_1353.1_58443.t1 6 6 Ank_3 922 949 4.8e-32 106.7 3.5e-07 0.00057 19.8

Transcript
Transcript IDpfu_aug1.0_1353.1_58443.t1
Definition-
>pfu_aug1.0_1353.1_58443.t1
atgtgcaggtatgcatatcggattggaatacaatggtgtattttaggaacagcacttggctattcgcagacgaaaataga
gcaccttcaagagatattcccccataaaccagcttatagaaactttgttatgctttggcaatggtaccgcattgtactcg
atcatacgaaaaaggactttctactaatacgacaattcttatcaaaggcttttttagactatggagacgttagtttggca
aaggaaatctcaagccaacaacaagatctcccgaagaacctcatagagaaaattgacaaagtaaactttgatcagtcaga
agaaatagagattcggagtacttggtggtatcaacttaacctattaggggtgacaaatccagaagaaacgagcgatgtat
tgaccagggacgaaagagatatatccaacgaacgaggggaaagaatacagatagttgaccaagcagaggaagaagtcata
aaggaaatccgtaaagtagcatatcgcatcggcaatgagtggcagatgttaggaatagctttaggcttcacgccaagtca
gctttgtaaactgcaagaagagtatccacaggaaccaaattatagaaacttcataatgctgtggcaatggcattccaagg
ctttggaatatgcgaaaggaaataccaataccatcagacaatacttatcgaaggcatttgttgatacaggaaaccattct
ctggcagatgaaatatcaaatcagcaccaagctattccagaagaattagaagaacgcatagagaccataaatttctacca
aacggaagaagaaggtaccattcaaagtataattctgtcttggataaaagcagacgaaaccttctatgaaacagaggcct
gtcgtatctccctgaagagactagaatcggaggggatcgtcacgattgttggggcgccaggagatgggaaaacagccatt
gggatacacctcgctctcgaatattaccagaggggatataaaatttacaatgcacattcagtgcatgatataatgaaaag
ccataaaaattcttgtccgcagatttttctaatagatgatcctattggagtacatgttatggacgatgaaaaggttaggg
catgggtatcttataatacagagatccaggcatttatccaaaatggtggaacaaaactaatagctacagtcaggaaaaat
attatgaacacttgtcaacaacagataaacaaaaccatactagtgaagaatcaagtcgacttgaccatggtacattgttc
cacgcgagagaaggaggggattctgttgcaacaggctggcgggaaaattaacaaggacgacgtgaaacacatgattgaac
caaaatactacccagctttcccattgctgtgtcatttcatcgtcaacggaagcaagcatatctcaaattacagcgcaaga
caacagccaacatcagtaatctataacttcattgatgaacttacaaatacacacaggtttcattactgtgccctcgtaat
agtagcaatgcatgatgggaaatttgatcaacaaattttggacgacttagaagatagaagaaaattgtgcaaaataatag
aactctgtgggcttgactgtagtccaagttccctgttcaacttggggaaaagttttgatgaaatgttagggatctaccta
acggaagccaagctcggtgttgaattcttgcacgatcgaatctacagcgctgttgtgtatcactttggttcacgccatct
caattttctatggaagaactgtagctcagtatttatccgtgatatgataaggtctgaaaatgcttcacttagtggagatt
ggagcaatgaagacgaatccaatcttgtcgtacgcgtaaaagaacaaaactatgaatcctttgcgaagcggataaccgat
gatctaaaaaatggaaatgtagttgatgttttccttaatccatccttacaagatgaaagatttcagattgtactagccga
ccagcttcttgaattacccatttcagagttaaagaatcttctttgtcttatcccacacaatacgtttaaagaaaaatcta
cacgacaggggaaaaccagccttgattttggagtgttaacgagctccccttttcattggatatgcaaactaggtctccac
aaactattcactgctgttttggggaaaatgcccgatagggagatatttgtccgaaacattccgggtcataccggcccttt
acattttgcagctggatttgggcatctggagattgtaaaaagcctagttgagctgggagttgacgttaattctcgttcaa
aactcgaatgcgatgacaattccgtcggtgcttattatccaagttttactccaattttctatgcagtgcgtcaaaatcat
cttgaagttgccgacttcctcttaaaatctggtgcaaacccagacttggtgagagatcacggcgcctcaccaatgcttct
tgctgctgacaagggtcaccacagaatgattaaaatcttactcgactattcagctgacccaaacatttgctgttcccatg
ggacgtctcccctgttcatagcatcccaagaaggacataagaatgctgtacgagtacttatggaaggaggtgctataata
gactaccaaaacatccaaaagaagggtttagccccgctacatatcgcagtaaagaacggtcactataacacgtcgaagac
tctgcttgacaaaggcgccgaccccaatttacccgactccgaagggaacacacctctccactttgccgtctcaaatggca
aaggcgatatagctaagttgttgcttgtctacggtggtgatccgaacttaccaaacaaacgaaatgaaacaccaaaatat
ctgtcatctgagcggattggtttaaatgattcattttctgcggaggacagcaccatattgtacaaacgttga

Protein
Protein IDpfu_aug1.0_1353.1_58443.t1
Definition-
>pfu_aug1.0_1353.1_58443.t1
MCRYAYRIGIQWCILGTALGYSQTKIEHLQEIFPHKPAYRNFVMLWQWYRIVLDHTKKDFLLIRQFLSKAFLDYGDVSLA
KEISSQQQDLPKNLIEKIDKVNFDQSEEIEIRSTWWYQLNLLGVTNPEETSDVLTRDERDISNERGERIQIVDQAEEEVI
KEIRKVAYRIGNEWQMLGIALGFTPSQLCKLQEEYPQEPNYRNFIMLWQWHSKALEYAKGNTNTIRQYLSKAFVDTGNHS
LADEISNQHQAIPEELEERIETINFYQTEEEGTIQSIILSWIKADETFYETEACRISLKRLESEGIVTIVGAPGDGKTAI
GIHLALEYYQRGYKIYNAHSVHDIMKSHKNSCPQIFLIDDPIGVHVMDDEKVRAWVSYNTEIQAFIQNGGTKLIATVRKN
IMNTCQQQINKTILVKNQVDLTMVHCSTREKEGILLQQAGGKINKDDVKHMIEPKYYPAFPLLCHFIVNGSKHISNYSAR
QQPTSVIYNFIDELTNTHRFHYCALVIVAMHDGKFDQQILDDLEDRRKLCKIIELCGLDCSPSSLFNLGKSFDEMLGIYL
TEAKLGVEFLHDRIYSAVVYHFGSRHLNFLWKNCSSVFIRDMIRSENASLSGDWSNEDESNLVVRVKEQNYESFAKRITD
DLKNGNVVDVFLNPSLQDERFQIVLADQLLELPISELKNLLCLIPHNTFKEKSTRQGKTSLDFGVLTSSPFHWICKLGLH
KLFTAVLGKMPDREIFVRNIPGHTGPLHFAAGFGHLEIVKSLVELGVDVNSRSKLECDDNSVGAYYPSFTPIFYAVRQNH
LEVADFLLKSGANPDLVRDHGASPMLLAADKGHHRMIKILLDYSADPNICCSHGTSPLFIASQEGHKNAVRVLMEGGAII
DYQNIQKKGLAPLHIAVKNGHYNTSKTLLDKGADPNLPDSEGNTPLHFAVSNGKGDIAKLLLVYGGDPNLPNKRNETPKY
LSSERIGLNDSFSAEDSTILYKR

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