Gene
| Gene Model ID | pfu_aug1.0_1353.1_58445 |
|---|---|
| Locus | scaffold1353.1 : 34546 ... 40978 : + |
| To GenomeBrowser | scaffold1353.1:34546..40978 |
| Genes list of scaffold | scaffold1353.1 |
| Synonym | pfu_aug2.0_50.1_00131 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1353.1_58445.t1 | 2 | 1 | Ank_2 | 174 | 277 | 4.5e-31 | 107.0 | 7.1e-19 | 1.8e-15 | 57.0 |
| pfu_aug1.0_1353.1_58445.t1 | 2 | 1 | Ank_4 | 205 | 233 | 6.9e-14 | 51.9 | 1.2e-08 | 3.1e-05 | 24.3 |
| pfu_aug1.0_1353.1_58445.t1 | 2 | 1 | Ank_5 | 205 | 233 | 1.1e-10 | 41.3 | 1.5e-07 | 0.00037 | 20.6 |
| pfu_aug1.0_1353.1_58445.t1 | 3 | 1 | Ank | 206 | 234 | 1.7e-17 | 62.2 | 3.5e-11 | 8.7e-08 | 31.6 |
| pfu_aug1.0_1353.1_58445.t1 | 3 | 1 | Ank_3 | 206 | 231 | 2.0e-14 | 52.2 | 3.4e-09 | 8.4e-06 | 25.5 |
| pfu_aug1.0_1353.1_58445.t1 | 2 | 2 | Ank_2 | 208 | 300 | 4.5e-31 | 107.0 | 2.1e-18 | 5.2e-15 | 55.5 |
| pfu_aug1.0_1353.1_58445.t1 | 2 | 2 | Ank_5 | 237 | 283 | 1.1e-10 | 41.3 | 1.1e-06 | 0.0028 | 17.8 |
| pfu_aug1.0_1353.1_58445.t1 | 3 | 2 | Ank | 251 | 279 | 1.7e-17 | 62.2 | 4.1e-09 | 1.0e-05 | 25.0 |
| pfu_aug1.0_1353.1_58445.t1 | 3 | 2 | Ank_3 | 251 | 277 | 2.0e-14 | 52.2 | 1.1e-07 | 0.00027 | 20.9 |
| pfu_aug1.0_1353.1_58445.t1 | 2 | 2 | Ank_4 | 252 | 300 | 6.9e-14 | 51.9 | 9.9e-09 | 2.4e-05 | 24.6 |
| pfu_aug1.0_1353.1_58445.t1 | 3 | 3 | Ank_3 | 286 | 300 | 2.0e-14 | 52.2 | 0.7 | 1700.0 | -0.2 |
| pfu_aug1.0_1353.1_58445.t1 | 3 | 3 | Ank | 289 | 300 | 1.7e-17 | 62.2 | 0.17 | 410.0 | 1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1353.1_58445.t1 | gi|349933831|dbj|GAA29149.1| | 1.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_1353.1_58445.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1353.1_58445.t1 atgcagggtagtcacgctggatatcctatccttttttctatactactacgctttcccattgctgtgtcatttcatcgtca atggaagcaagcatatcttaaattacagcatgataggaaatttgatcagcaagatttcgacgactccgaagaaagctaca gaggaaaattgcgcaaaatgattgaactctgtgggctcgactgtagtccaagttccctattcaacttggagaaaagtttc gatgaaatgtcagggatctacctaacagaagccaagctaggtgttattgtcttggacgatcgaatctacaacactgcagt gtatcactacattaaatggaaatgtaccttacaagatgaaggatttcagattgttctggccgaccagcttctagaattac ccatttcagagttaaagaatcttctttgtgttattccacaaaatacgtttaaagaaaaatctacacgacatgggaaaacc agtctagattttggtgtgttaacgagctcaccttttcattggatatgcaaactgggtctccacaaattatacaccgctgt tttgggggaaatgcccgatagagatatatttgttcgaaacatcccgggtcataccagtcctttacattttgcagctggat ttgggcatctggaaattgtaaaaagcctcattgagtttggagctgacgttaattctcgttcaaaactcgaatgcgacgac gactccgtcggtgctcattattattcaagttttacgccaattttctatgctgtgcgtcaaaatcatcttgaagttgccga cttcctcttaagatctggtgcaaacccagacatggtgagagatcagggcgccccaccaacgcttcttgctgctgacaagg gtcaccacagaatgatcaagccttacttgactattcggctgacccgaatatttgctgttaccatgggacgtcgcccttat tcagagcatcaaaagaaggacataaggatgccgtccgagtacttatag |
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Protein
| Protein ID | pfu_aug1.0_1353.1_58445.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1353.1_58445.t1 MQGSHAGYPILFSILLRFPIAVSFHRQWKQAYLKLQHDRKFDQQDFDDSEESYRGKLRKMIELCGLDCSPSSLFNLEKSF DEMSGIYLTEAKLGVIVLDDRIYNTAVYHYIKWKCTLQDEGFQIVLADQLLELPISELKNLLCVIPQNTFKEKSTRHGKT SLDFGVLTSSPFHWICKLGLHKLYTAVLGEMPDRDIFVRNIPGHTSPLHFAAGFGHLEIVKSLIEFGADVNSRSKLECDD DSVGAHYYSSFTPIFYAVRQNHLEVADFLLRSGANPDMVRDQGAPPTLLAADKGHHRMIKPYLTIRLTRIFAVTMGRRPY SEHQKKDIRMPSEYL |
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