Gene
| Gene Model ID | pfu_aug1.0_1353.1_58446 |
|---|---|
| Locus | scaffold1353.1 : 41226 ... 57775 : + |
| To GenomeBrowser | scaffold1353.1:41226..57775 |
| Genes list of scaffold | scaffold1353.1 |
| Synonym | pfu_aug2.0_50.1_00130 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1353.1_58446.t1 | 1 | 1 | WWE | 45 | 109 | 2.3e-06 | 26.9 | 9.4e-10 | 4.7e-06 | 25.9 |
| pfu_aug1.0_1353.1_58446.t1 | 2 | 1 | WGR | 93 | 107 | 1.5e-21 | 76.1 | 0.97 | 4800.0 | -2.5 |
| pfu_aug1.0_1353.1_58446.t1 | 2 | 2 | WGR | 227 | 296 | 1.5e-21 | 76.1 | 8.9e-25 | 4.4e-21 | 74.6 |
| pfu_aug1.0_1353.1_58446.t1 | 1 | 1 | PARP | 291 | 341 | 2.8e-09 | 36.7 | 1.3e-12 | 6.3e-09 | 35.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1353.1_58446.t1 | gi|301609566|ref|XP_002934323.1| | 2.00386e-43 |
Transcript
| Transcript ID | pfu_aug1.0_1353.1_58446.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1353.1_58446.t1 atggagtcccgtcgtcacagtcagtcagagtgcaagtctcaagtatgcgctgctaaaaggacagcaaatgatgagtcaga aggcagttcagcaaagaaatcacggtctggagcctcgaccatcgatggttttagtgtacgttgggagtgggagggcgata aaggagtttggatgcagtatgcagaggagatgaacaatgaacttatagatgcatttgttggtggaaagaaacagatggac tttgatgttggaccaaaagtgaccatgcaaatcatttttgacaaaatggttcagaaaaacaagaggacaggatgggaaag aagattacgatgtgcattggctgacaaaaaagcggcagagagtcctgaaccaacagatgtgaagccagttccatcagctt cttcatctaacggcactactaaaaagggaaaagggtcaggggtcaaggtcaaagaagaacctgaggatgaggaagaagaa gaagtcaagccaaaagcaagcggaaaagacaaaaagggatcagcaaaaagtggtgggaaaaaagggaaatcaggcggagc taggggtgatgatgaaggaacggaggaaatagtaaaaacacgtgttgtgacgggcaaagctccagtcgatgaggaatgta ccactatgttaaacaaagcacacatcttcagtgaaggcaaagatatatgggactgtatgttaaaccagactaacgtaggc aataataacaacaagtattacatcatacaattgttggaagagaacgccaagaagtcgtaccatgtatggcagagatgggg tcgagtgggatatagcgggcagaataacctggtaccgtgtggaccagacctggatcaggccaagaaaatattcacaaaaa agccagatggtatgaaagttccaattggaaaaggtaaaaacactggagtaaagaacccgtcaggatatacccttaattat aacgagtatattgtgtacgacaccaaacagatcaagatgaagtacctgctgcgggtaaagttcaactataagtga |
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Protein
| Protein ID | pfu_aug1.0_1353.1_58446.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1353.1_58446.t1 MESRRHSQSECKSQVCAAKRTANDESEGSSAKKSRSGASTIDGFSVRWEWEGDKGVWMQYAEEMNNELIDAFVGGKKQMD FDVGPKVTMQIIFDKMVQKNKRTGWERRLRCALADKKAAESPEPTDVKPVPSASSSNGTTKKGKGSGVKVKEEPEDEEEE EVKPKASGKDKKGSAKSGGKKGKSGGARGDDEGTEEIVKTRVVTGKAPVDEECTTMLNKAHIFSEGKDIWDCMLNQTNVG NNNNKYYIIQLLEENAKKSYHVWQRWGRVGYSGQNNLVPCGPDLDQAKKIFTKKPDGMKVPIGKGKNTGVKNPSGYTLNY NEYIVYDTKQIKMKYLLRVKFNYK |
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