Gene
| Gene Model ID | pfu_aug1.0_1353.1_58451 |
|---|---|
| Locus | scaffold1353.1 : 136021 ... 140985 : - |
| To GenomeBrowser | scaffold1353.1:136021..140985 |
| Genes list of scaffold | scaffold1353.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1353.1_58451.t1 | 1 | 1 | AIG1 | 44 | 252 | 0.0 | 208.5 | 0.0 | 0.0 | 207.9 |
| pfu_aug1.0_1353.1_58451.t1 | 1 | 1 | MMR_HSR1 | 44 | 144 | 2.9e-09 | 36.8 | 5.2e-12 | 7.1e-09 | 35.6 |
| pfu_aug1.0_1353.1_58451.t1 | 1 | 1 | FeoB_N | 44 | 138 | 8.5e-06 | 25.1 | 1.0e-08 | 1.4e-05 | 24.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1353.1_58451.t1 | gi|126341134|ref|XP_001371073.1| | PREDICTED: GTPase IMAP family member 7-like isoform X1 [Monodelphis domestica] | 9.99995e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1353.1_58451.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1353.1_58451.t1 atgtggatgttgcctagtgtgacactatcagggttaattgcatcgtttgatttgattaccatgctgatggcgtttgaaga aattgaagacttcgataaaagagccgttccagttccgagtgaagaaatgcggattttgttgatcggaaagacgggtgtag gtaaaagtgcgattggaaacgcaatgctcgggaaaaattcctttgaatcaaaattgtctggacagacggtgacgaaggcc atgtcctttgacagagctcggcgttacgggaagaacctgttggtgatagatacaccaggtcttcacgacacgttatatcc acgggaaaaagtattgtctgaaattgcgaaatgttacgccgtctcctcgccaggtcttcacgccgtcatcatggtcatag aggcgggaagatttacggcggaggagcaacggacgttaaatttctttcaaaatgcgtttggggagcacgtttttgagtat atgactgtaatattcacaggaaaagataaactagattccgagagtttgactgtaaaggaatatgtcgacacattggaaga aactgcgttaaaggagttgttacagaaagttgaaaacaggtatcttttattcggaataaaaggcgacccgaatgaaagag aacaagaagtgaaagatttactgattatgatcgaaaatatggtgaacaaaaatcaaggtaaaatgtacacgaataaaatg tacgccaaagccgaagaagaacttctaaaagtttgggaagaagaatcaaattttgaaaaagaaaaacgcacgaaagaagt ggacgataaaattgcagaaatgcgtaatattcacaagaaattaaaacaggatcgcaccgccctgttgtaccagagagagg aatataagagaagaaatatcaggcttcttgaggaggaaatgggcgagaaatggcgagatttcagaagtcacgtgagacgt cgtgtcgaaagcaaagagaaattcagtgaaatgcgcttcttaaaaaatcttaacttcctcagtgacgatgttagtcatat ccctgattga |
|
Protein
| Protein ID | pfu_aug1.0_1353.1_58451.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1353.1_58451.t1 MWMLPSVTLSGLIASFDLITMLMAFEEIEDFDKRAVPVPSEEMRILLIGKTGVGKSAIGNAMLGKNSFESKLSGQTVTKA MSFDRARRYGKNLLVIDTPGLHDTLYPREKVLSEIAKCYAVSSPGLHAVIMVIEAGRFTAEEQRTLNFFQNAFGEHVFEY MTVIFTGKDKLDSESLTVKEYVDTLEETALKELLQKVENRYLLFGIKGDPNEREQEVKDLLIMIENMVNKNQGKMYTNKM YAKAEEELLKVWEEESNFEKEKRTKEVDDKIAEMRNIHKKLKQDRTALLYQREEYKRRNIRLLEEEMGEKWRDFRSHVRR RVESKEKFSEMRFLKNLNFLSDDVSHIPD |
|