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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13552.1_53965
Locus scaffold13552.1 : 1 ... 3735 : +
To GenomeBrowser scaffold13552.1:1..3735
Genes list of scaffold scaffold13552.1
Synonym pfu_aug2.0_816.1_21180

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_13552.1_53965.t1 gi|327284954|ref|XP_003227200.1| PREDICTED: ankyrin repeat domain-containing protein 54 [Anolis carolinensis] 7.0e-20

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_13552.1_53965.t1
Definition-
>pfu_aug1.0_13552.1_53965.t1
cggcatgcactggacatgttcccgttgtgacactcctactgagggcaggaacggacatttgctcagtagatcgtagtggc
cggactcctctctcagtagccaaatccaggctgagatttcttgtggaggaaaaatcttacacctcagaaagggtgaaaaa
tgaggcactccaggttagtgagatgatgaagacatacctacgcctgtctggtatgaacgatgacgcagaccagctggaca
tactttgtgaccagttacgtaaagtatccactcgagtagaaatggacaatgttaatacactgatggcagatctcgccagt
ttgtcgttagaaaagaagagtaagccaccttga

Protein
Protein IDpfu_aug1.0_13552.1_53965.t1
Definition-
>pfu_aug1.0_13552.1_53965.t1
ACTGHVPVVTLLLRAGTDICSVDRSGRTPLSVAKSRLRFLVEEKSYTSERVKNEALQVSEMMKTYLRLSGMNDDADQLDI
LCDQLRKVSTRVEMDNVNTLMADLASLSLEKKSKPP

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