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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13552.1_53966
Locus scaffold13552.1 : 5876 ... 27670 : +
To GenomeBrowser scaffold13552.1:5876..27670
Genes list of scaffold scaffold13552.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_13552.1_53966.t1 1 1 CRAL_TRIO_2 94 156 8.7e-08 32.1 4.1e-11 2.0e-07 31.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_13552.1_53966.t1 gi|242014915|ref|XP_002428128.1| Neurofibromin, putative [Pediculus humanus corporis] 0.0

Transcript
Transcript IDpfu_aug1.0_13552.1_53966.t1
Definition-
>pfu_aug1.0_13552.1_53966.t1
atgtgcagcgaactatatgcagtttacgacaagagtcctgttaccttgacctctaaccccaaaatcaataggggtcatcc
tcgactcatggagattggacaaataactccggactggacatttgtccggagttcagcccctggaagcactgtaggtagtg
ttgggatatttgccaccaggtggagcagtatggacatgacatctaccaagtttgaggagattatgtccaagcataacatg
cacgaaaaagacgagtttaaatcactgaagaatcttcatatcttctatcaggcgggaacgagtgttaacggaaaccctgt
gttttactacatcgccagacgatacaaagtaggtgagataaatggagatttgctgatttatcacgtactgttgacgctca
aaccatactacaacaaaccattcgagcttgtcatagactttacacatacttgtgctgaaaatagattcagaagattcaag
cttcatgccgaattccgcaagactttcattgtcttcttgcttctggcgatagaagttttccatcactgcttcgtgatcgc
tgacgttaccaaacacgccttcaagtttctcaatgatcattcttggtgtaatattaccaagaccacactcaaagtgctga
agatgagcttggcagagttttccttgcccaaattctaccagttgtttggtatcagtaaggttaaatcggcggccgtcagt
gcattccgcacgagtttccggcctggagatagatcattcaccatgtccccaccagaacatgaaaagatgtcgctatcgtc
actagagactatcgtagatgcactgcttgagataatggaggctgcaatgaaggacattccaaactgtgattggttacagc
agtggacggacctgtcacggaggtttgcttttcagtataaccctgccctccaaccacgtgccatcatcgtgtttggctgt
attagtaaggctgttacagactccgaaatgaaacagctcctgaagatcatgatgaaggactcgtcaatccacagattttt
gttctgggtggccatatctgttttacagttagacgagcagtcgttatacgccgcagggttagctctgttagaacagaatc
tacatactctagacaatatgggactgtttgatagagagaaattagagaagataatgatggacaccagggaccccctagag
tggcactttaagcagcttgaccatgctatgggactgagttttaaagccaactttaattttgcgttggtcggacatttatt
gaaaggattccgtcacccgagcccaaccactgtgtctcgtaccatcagagttctcaatcaactgctgtccataacagtca
aaccaacaaacagagacaaatttgaagtcacccctcagactgttccctatttggcagcctatgatcatgtctttgatgaa
tcaaatatcaaatggtag

Protein
Protein IDpfu_aug1.0_13552.1_53966.t1
Definition-
>pfu_aug1.0_13552.1_53966.t1
MCSELYAVYDKSPVTLTSNPKINRGHPRLMEIGQITPDWTFVRSSAPGSTVGSVGIFATRWSSMDMTSTKFEEIMSKHNM
HEKDEFKSLKNLHIFYQAGTSVNGNPVFYYIARRYKVGEINGDLLIYHVLLTLKPYYNKPFELVIDFTHTCAENRFRRFK
LHAEFRKTFIVFLLLAIEVFHHCFVIADVTKHAFKFLNDHSWCNITKTTLKVLKMSLAEFSLPKFYQLFGISKVKSAAVS
AFRTSFRPGDRSFTMSPPEHEKMSLSSLETIVDALLEIMEAAMKDIPNCDWLQQWTDLSRRFAFQYNPALQPRAIIVFGC
ISKAVTDSEMKQLLKIMMKDSSIHRFLFWVAISVLQLDEQSLYAAGLALLEQNLHTLDNMGLFDREKLEKIMMDTRDPLE
WHFKQLDHAMGLSFKANFNFALVGHLLKGFRHPSPTTVSRTIRVLNQLLSITVKPTNRDKFEVTPQTVPYLAAYDHVFDE
SNIKW

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