Gene
| Gene Model ID | pfu_aug1.0_13559.1_53967 |
|---|---|
| Locus | scaffold13559.1 : 1 ... 9481 : + |
| To GenomeBrowser | scaffold13559.1:1..9481 |
| Genes list of scaffold | scaffold13559.1 |
| Synonym | pfu_aug2.0_1237.1_24794 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13559.1_53967.t1 | 1 | 1 | CPSase_L_chain | 419 | 492 | 2.3e-22 | 79.1 | 3.4e-26 | 5.1e-22 | 78.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13559.1_53967.t1 | gi|241172953|ref|XP_002410805.1| | propionyl-coenzyme A carboxylase, alpha polypeptide, putative [Ixodes scapularis] | 2.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_13559.1_53967.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13559.1_53967.t1 tacgtcttacagagaaagacattgacaaattaccacaaagtatgccatttaactgcgatttgtgtattgacaatatacag tgccttactttgcaaagtagtgttgatgtgaactcccatgacacgcactacaacagtaccaacacatcgatcattgcagg tacaacggtgactccagtcataactacgtcatctggacatgaacaaaattcgttaaaacgtaaatctgcaaaaaatacaa agatctcagatgggtatcaaagagacatttcacgtcttaaagcgtatgtagcagacctagagcttaaagttgatgacctt caaaagaccgtatcactcatgcaattagacaaggatgtacgccagggtcagggattagacacgatgggtaataataacat tacaataccgacacataatgggagccatcgcgccaccatacaaacaggaaacacgcctgtaggggataatggctgtgcta atacccagtgtagatgctcacaatcgaacctagaacataaagtggatcttcttttagacttccaaaaaatgttcgctagc tttactgccacacaacaagctacacgtgcaattaacgtagccgggaatcagcatgctgccattccaccttatatgcctat gtttacacctatgggtggtctactacctcatgtacatccttttatggggtatccatacacacacccctctgctccttata accagcagttaggagctcaaaggattccaccgataattagacccccaccgccaacatatccggtgtttcctacagcccct acaaatacgaacatttctttgtctagagtccatggtgatggccatcgcatgaatactcggaacgagcatcattttagaga aatgcagacacctgtccatcttcttacatctggaggtcatagtcaaggacctagaccaaatgatactcatatactgtatg aaacatcactgcaatctgggagaacagtacaacatggtgactcctcgtcgatcaagcatatagataacgacacaggcact acttcgtctatgcccagaaatagtgtgcaatcacaatataaggatatatcgtctccacatgcagaggaaacagtacgcat agatgacctttctgcgtcaagaggagacgtacagaggacatacacggataacaagcagttatttcaaacatactcgctgc aaactaatgacaatatgggcttaccatgtacaccgcctgtaagacctgtgaatactaatcatagcaagccgctagtaatg gctgatgaggcctatcacatcggtccacctgccgcctcacacagctaccttagacatgataagattctagacgtggctaa gtcagcaggagcacacgccatccatccaggttatggcttcttgtcggagaacacagagtttgccgagctctgtagtaaag agggcgtaattttcattggtcctcctgcatcagctatcagagatatgggcattaagaggtaa |
|
Protein
| Protein ID | pfu_aug1.0_13559.1_53967.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13559.1_53967.t1 RLTEKDIDKLPQSMPFNCDLCIDNIQCLTLQSSVDVNSHDTHYNSTNTSIIAGTTVTPVITTSSGHEQNSLKRKSAKNTK ISDGYQRDISRLKAYVADLELKVDDLQKTVSLMQLDKDVRQGQGLDTMGNNNITIPTHNGSHRATIQTGNTPVGDNGCAN TQCRCSQSNLEHKVDLLLDFQKMFASFTATQQATRAINVAGNQHAAIPPYMPMFTPMGGLLPHVHPFMGYPYTHPSAPYN QQLGAQRIPPIIRPPPPTYPVFPTAPTNTNISLSRVHGDGHRMNTRNEHHFREMQTPVHLLTSGGHSQGPRPNDTHILYE TSLQSGRTVQHGDSSSIKHIDNDTGTTSSMPRNSVQSQYKDISSPHAEETVRIDDLSASRGDVQRTYTDNKQLFQTYSLQ TNDNMGLPCTPPVRPVNTNHSKPLVMADEAYHIGPPAASHSYLRHDKILDVAKSAGAHAIHPGYGFLSENTEFAELCSKE GVIFIGPPASAIRDMGIKR |
|