Gene
| Gene Model ID | pfu_aug1.0_1357.1_22556 |
|---|---|
| Locus | scaffold1357.1 : 19556 ... 40227 : + |
| To GenomeBrowser | scaffold1357.1:19556..40227 |
| Genes list of scaffold | scaffold1357.1 |
| Synonym | pfu_aug2.0_113.1_10279 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1357.1_22556.t1 | 2 | 1 | Sema | 21 | 129 | 1.3e-40 | 139.2 | 3.9e-13 | 1.9e-09 | 36.5 |
| pfu_aug1.0_1357.1_22556.t1 | 2 | 2 | Sema | 151 | 332 | 1.3e-40 | 139.2 | 4.0e-33 | 2.0e-29 | 102.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1357.1_22556.t1 | gi|195583934|ref|XP_002081771.1| | GD11191 [Drosophila simulans] | 1.99965e-42 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1357.1_22556.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1357.1_22556.t1 atgaaagtgtacattttgacgcgaaagataatagtaaaagatttcaatgtaacaggcaacagattttctgtatgtagata tcaagtaaagtcagtcgattattgtcagaatcatataaaatacatagtaagaaattctaccactgacaataagatatttg tgtgtggtactaatgccaaccatccagcatattattctgttgagataaatgctacatccatcacagccagtgagccagta gaagtaaaagaggatgagggggcgtgtcctcgcaatccttttgataatgtcacaaatgtttttgttgagcacgggaatcc gggaggagttgctgccctttactctgccacaataagcactttataccgcaaacccagaatactccgaccagctcttcaat taaacggccagaaaatcagtgatacactaatgaatgtggagagcaatgtttggcttaatgaggatgcagcaatggtcaat gatactatttatgggcttttcaccacaaatctcaatggtctatcagcgtcagcaatctgtgctttcacactagacagtat taaagcctcctttgatggccagttcaagtaccaagaaatggacaaatcctattggctgcctgtaccagaacaggatgtac ctgtcatagatggaaagagaccaggacagtgtgtgaatgactcacgaaaactgaaagagacagttgaaagtttcatcaga atacgaccgctgatggacaaagcagttgcacataagtttggcaagccgatattctacaagagtggggttcagatgcaaaa actggtcgtagtcaaagacaagagtatcaatgaaagaattctttttgtcacagctacaagtgatggaagcgtgtacaaaa tttcgtcattgattgaccacccagaccaatccaacagtaatataactagtgtagtagctacaaagttctcccccttacca gtcagacaacctatatgggatctcaaaattcataatacagatgcctacattagcacagactcctatgtacaacagttttc tttgataacctgtgataaatacgggaaaatggtggacctgtgtgttaacgatccatactgtagatggcagcaagatggtg atgctcagccctgggttggaaagtgtgtactagcaacatccaatgatctcagttatcgtccttcagtgacaagaacatta tacataattgtaggcaatgatgtgatacactacagacttctgagtacagctgtaatcacagtatctgagtatccctttac tctcgatggtcaacaagtggagtggcagttccgcaaggaaggtagtgacaactttgaccctgtatccataataactaaag gtcgacattacacaacaccagactatggtttagtgataacaaacattactggcgaggactcgggaagatacagggctgtt atcaaagatcccatgtcgtttaaagagactgttatagccattaagaatataatggcaccaaaagatcctgctgatgttaa agaatactttgaaaaggcttggatggaaaaattcagtgaatggtgcgatatgtttgaaaaagctaaaagattacaaaaag cttatgaagaaaataagtgtagtattacgtga |
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Protein
| Protein ID | pfu_aug1.0_1357.1_22556.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1357.1_22556.t1 MKVYILTRKIIVKDFNVTGNRFSVCRYQVKSVDYCQNHIKYIVRNSTTDNKIFVCGTNANHPAYYSVEINATSITASEPV EVKEDEGACPRNPFDNVTNVFVEHGNPGGVAALYSATISTLYRKPRILRPALQLNGQKISDTLMNVESNVWLNEDAAMVN DTIYGLFTTNLNGLSASAICAFTLDSIKASFDGQFKYQEMDKSYWLPVPEQDVPVIDGKRPGQCVNDSRKLKETVESFIR IRPLMDKAVAHKFGKPIFYKSGVQMQKLVVVKDKSINERILFVTATSDGSVYKISSLIDHPDQSNSNITSVVATKFSPLP VRQPIWDLKIHNTDAYISTDSYVQQFSLITCDKYGKMVDLCVNDPYCRWQQDGDAQPWVGKCVLATSNDLSYRPSVTRTL YIIVGNDVIHYRLLSTAVITVSEYPFTLDGQQVEWQFRKEGSDNFDPVSIITKGRHYTTPDYGLVITNITGEDSGRYRAV IKDPMSFKETVIAIKNIMAPKDPADVKEYFEKAWMEKFSEWCDMFEKAKRLQKAYEENKCSIT |
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