Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1357.1_22558
Locus scaffold1357.1 : 48106 ... 69428 : +
To GenomeBrowser scaffold1357.1:48106..69428
Genes list of scaffold scaffold1357.1
Synonym pfu_aug2.0_113.1_10281

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1357.1_22558.t1 gi|195400801|ref|XP_002059004.1| GJ15230 [Drosophila virilis] 0.0

Transcript
Transcript IDpfu_aug1.0_1357.1_22558.t1
Definition-
>pfu_aug1.0_1357.1_22558.t1
atggagtcagaggtagacggctctcagtcggccccagggtcggacggaggtccagggacatgttctacaggggctttact
cgtggttattggggaacctttctctgaggatcataaacaattgattttagcagatgtcacaaatggtttcaagtgctgga
gctgtgactctattgacatcaatgaagagctggcgcatatcgctaaccgtgctgatgtcggcgaggagggaactgaagct
aacgatggggcaaacgacggtatccgagagaggatcctgcggtaccgttcagatgggctggcggtggagatcctggtgaa
cccacgatgtcagaccttgacacagtctctgcgtgtattcctgagttctccaaccacatacaaacatctgatatatgctg
gacattacttcagtggcagcggagcctgggttctacaggatgatgtgttcacagtgtcaaagatggttcagatttttaag
gatgctgatgtggagacgtctctgaaacagatccctgatgtaaaccttattctacatctcggtgcagcatcagaatggaa
atccttacggaacatccctggatataaagaccttaaagtacagatctctccagaagccactcttaccaatcttcatggtc
ccctacagtttgctgcctacatctccaacttcatcaatccgctgaatctctctgatttactacaagttactgactatgtt
ggttgtttaaaatttgtcaagccgacaatatacatattccctggttgtgagggagactctgcactatttgtcattaatgg
atttaatttgttagtgaatggtggttttagaagaaagccttgcttttggaacatttctagacatttagatagaatagatg
ctatgcttttaacacatttaggaagtgataatctgtttggcgtttcagccatgttgcaaagaaaagctttaggaaatatt
catccccagcttgggtatttgtttatgaattctatagataaactcccttctcctcctccagagaatggtgagaaaaagcc
aagtctgtgtatcaacctggcagaggaaggaagcaaacttgttgattatgcaaaacaaatgggactttcaccctatccat
gcctgcgccaagcaactggccctcaaataacaccaataaatctgtaccttaaggtaggatatggctcactagacatgtac
atactcaatccagtttctgacacaaaggaattgaaggactttcaccagcagtggaacaaacatgttgctgagtttgggat
atcccaaagtctacctcttccctccttgctctcagtatgtgccttgttagtgtggaaaccagccaatcccaatgagaaaa
tcaacagaatattcttccctggtaatgcaccacaacacaaaattatagaagggttagagaaactaaagcatctggatttc
cttaagcacccctcatgttcagcaaaagatcttcaagccaaacctttgaaaaaagcaacaactactggcaggccaagcct
tggtggtaaggcacctgggaggccattatctgccagaacagaggcacacaaacaagtagcagagaagaaggaacttacaa
gtagaccaaagccagatagcaacaaaacaaatgatacaaaagctaagaatggaacacctgaaacgaaaccaagtgcagca
tctcttaagaagccaaccttgaacaaaaagccaaaggcacctccaactgatactaagtcttcaaaacctgatgaaaaacc
caaacctcaagcagcaaccacaaccaagactgctactccaactaaagcatcaactccaagaaaggaaaccccagaaaaga
aatccctaacaaacagtgccaagaagccaactacaaatggtaaatctacaaaagcttcaagtccagttaaagcaacagag
acaaaaccaaaggaatcaccaacaaaaccagcagaagtccccattgaagctcccaaggaagaaaaacctgcagaaaattc
cttgataagcatctcgccagaggaagttcctctccaacaggaacctgtgaaagaggagaacaaagaaccaattgatctta
actctgatctgaatcagtttgatgctcccccagtttcttctgctcctcttgatccattcgaaatgctggacactaaacct
gaacaaatggatatgctgaaaaatgacttacagcaagatcttctcatgccggagaagaatggttccgataagccaaatga
aattgacgctctaggagatgttgtagaaaaaccacagtcacttccagacccagtagcattccctgctcaagagccagacc
ttatacctgatactgaaccggtaaaggacgtttctccagaacctgagcacaacactgaggcacttcctgatcctgatgtt
gtaccatccaccaaagcatcagatccagacctcttggttggaggtgccaaggaagaattagaagatgatgaaaaaagagg
tttagatgaagagctaactgaaggatttgaacataaggaagaaggtataacacatactgagagtagatcacccattctta
gtcctgtagaacctgataccaagagtgatgctttagatgatcatgatgagggggatgaagatgaggtgtccccagatgaa
gctgatagtcaaggtgatgtgggggaactgacaacctcacaaacagaggagataggggatatctctggtgtatctccttc
tgcctatgacaacatgggattcgtggactcactgaatgaaggaaaggatggagagcccaaggaaatagggcgtgaaccct
cagaggaaaaggatgaagtagaggatgaggaagatgaggatgaaggaattggtaaggacacaatggaggcatcccacatt
cctgaagcttttgagaaagatgtaactcctgatccaccagaacttcaggacccacatgatgatatcgttcctaagaatac
cttaaatattgatcctcgtgagcagtatgtggcaaatgaccagcctctggacagtattaatgaagaaggagaagaaaatg
acggaggcttcagtatgaggatggatggaggacttaatccatttaatggtcttgatcaagcacaaattccttcagcccat
actgatcaacaacagttccaagatccattcagtattggtggtcctggccagggttttacgtttggccatgtaggtcagac
tgcgccatcacagcagccttatgctcggcagattccctgtcaggaaggctatgatccatatgaagatgaggaggatggtg
aaatgcaggagcaggagttcaaccctgactcagagtggggaaagcctatggggcttccctctcctttacccccagaggaa
aaagaggcttcaagtggaccaactaaaaagaacattacaaatggaaaggctactaataacgagaaatctcagaccaacaa
agcagctgcaaatccaaaaggagcaatggctgcaaagaagacgacaacttctaccacctccacatctaaagcgacggaga
aagagaaaagcaacaaatcgtctgttacaaaaaccacaaaaaattccacagtgactaaaagtgaaacaacaacaaaagga
gagaagctgaacacttcaagggttgaaaccacaactaaaacaaccacacagaagtcacgtccatccactgctggtggtat
atcagagccaaagaccaagccaccacataggccagccaccgccaccggcagtagccgctcgtcaccagccaccagtaaaa
tgccatcacttccaccacacacttccttttatgtagatctagcatacatccctcatcacggagatccagcttattgtgat
gtagaatacttcaagcgtgtccgagccaggtactacatttacagttcacagtccccaaatcctgtcacgcttaatgccct
ggtagaagctaaacagacatgggaagacaaagatctccaagttaccctatatccaacgtatgataatgacacgctgagac
actggatggccctgaacgagcagaagcttcatgatgtgaaaatagaagtggcagcctcaccagaagttcgctatagcaga
tttggagcaatctctcttatgctttattttcattaa

Protein
Protein IDpfu_aug1.0_1357.1_22558.t1
Definition-
>pfu_aug1.0_1357.1_22558.t1
MESEVDGSQSAPGSDGGPGTCSTGALLVVIGEPFSEDHKQLILADVTNGFKCWSCDSIDINEELAHIANRADVGEEGTEA
NDGANDGIRERILRYRSDGLAVEILVNPRCQTLTQSLRVFLSSPTTYKHLIYAGHYFSGSGAWVLQDDVFTVSKMVQIFK
DADVETSLKQIPDVNLILHLGAASEWKSLRNIPGYKDLKVQISPEATLTNLHGPLQFAAYISNFINPLNLSDLLQVTDYV
GCLKFVKPTIYIFPGCEGDSALFVINGFNLLVNGGFRRKPCFWNISRHLDRIDAMLLTHLGSDNLFGVSAMLQRKALGNI
HPQLGYLFMNSIDKLPSPPPENGEKKPSLCINLAEEGSKLVDYAKQMGLSPYPCLRQATGPQITPINLYLKVGYGSLDMY
ILNPVSDTKELKDFHQQWNKHVAEFGISQSLPLPSLLSVCALLVWKPANPNEKINRIFFPGNAPQHKIIEGLEKLKHLDF
LKHPSCSAKDLQAKPLKKATTTGRPSLGGKAPGRPLSARTEAHKQVAEKKELTSRPKPDSNKTNDTKAKNGTPETKPSAA
SLKKPTLNKKPKAPPTDTKSSKPDEKPKPQAATTTKTATPTKASTPRKETPEKKSLTNSAKKPTTNGKSTKASSPVKATE
TKPKESPTKPAEVPIEAPKEEKPAENSLISISPEEVPLQQEPVKEENKEPIDLNSDLNQFDAPPVSSAPLDPFEMLDTKP
EQMDMLKNDLQQDLLMPEKNGSDKPNEIDALGDVVEKPQSLPDPVAFPAQEPDLIPDTEPVKDVSPEPEHNTEALPDPDV
VPSTKASDPDLLVGGAKEELEDDEKRGLDEELTEGFEHKEEGITHTESRSPILSPVEPDTKSDALDDHDEGDEDEVSPDE
ADSQGDVGELTTSQTEEIGDISGVSPSAYDNMGFVDSLNEGKDGEPKEIGREPSEEKDEVEDEEDEDEGIGKDTMEASHI
PEAFEKDVTPDPPELQDPHDDIVPKNTLNIDPREQYVANDQPLDSINEEGEENDGGFSMRMDGGLNPFNGLDQAQIPSAH
TDQQQFQDPFSIGGPGQGFTFGHVGQTAPSQQPYARQIPCQEGYDPYEDEEDGEMQEQEFNPDSEWGKPMGLPSPLPPEE
KEASSGPTKKNITNGKATNNEKSQTNKAAANPKGAMAAKKTTTSTTSTSKATEKEKSNKSSVTKTTKNSTVTKSETTTKG
EKLNTSRVETTTKTTTQKSRPSTAGGISEPKTKPPHRPATATGSSRSSPATSKMPSLPPHTSFYVDLAYIPHHGDPAYCD
VEYFKRVRARYYIYSSQSPNPVTLNALVEAKQTWEDKDLQVTLYPTYDNDTLRHWMALNEQKLHDVKIEVAASPEVRYSR
FGAISLMLYFH

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495