Gene
| Gene Model ID | pfu_aug1.0_13576.1_10622 |
|---|---|
| Locus | scaffold13576.1 : 3096 ... 5294 : + |
| To GenomeBrowser | scaffold13576.1:3096..5294 |
| Genes list of scaffold | scaffold13576.1 |
| Synonym | pfu_aug2.0_1925.1_18603 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13576.1_10622.t1 | 2 | 1 | RVT_1 | 20 | 105 | 5.4e-06 | 25.9 | 1.1e-09 | 1.6e-05 | 24.3 |
| pfu_aug1.0_13576.1_10622.t1 | 2 | 2 | RVT_1 | 127 | 167 | 5.4e-06 | 25.9 | 0.079 | 1200.0 | -1.4 |
Transcript
| Transcript ID | pfu_aug1.0_13576.1_10622.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13576.1_10622.t1 atgggtgcaatgccggaacatttgaaagaaggagtcctaacacctgtacttaagaagggcaaggacaaacgactgccttc aaactacagaggaattacagtgacaacaacagttagtaaaatactagaacacacactgcatggaagactgaacaagcagc aggaccccacccagagcaaattgcagaggggctttactgccaagacttctccactaaatgcagcattcatggtcagtgaa gcaatagctgagaaaaccgacaacaaagaaaatgttgccctggtaacactggatgcagaaaaagcctttgataggcaaat agaggaaaacaacctgggtacaagcattggaacaacaaagataggagctcccccagtagcagacgacatctctatgctac ccaccacaccactagatactcaggtgatgcttcatactgtgagccacaatgcagaacttgacaaagtcaactttaacgcc ataaagatcgagctgattgtgtatgggatccataaagatgaagagcctactctatgggaattgggtagagaccagattac cagctccacatcaactacacacctcggccttgtaagacaaaacaacaataagttcatcattgaacccaaaatacaagtag ccagacgaacaatgtacagtttgcttggggcaggattacatggcagaagaggcctaaacccattaacatcgtatcgaata tgggaatgctttggcttacctagatgtacatttggattggagtgtgtcaaacttactggaaaagatatagagacaatgga caaattccaaagaggtctcctcagacagctccaatctcttcctgatagacgtgccaacatcccagtatacagcctcgtcg gagccaaaccagtcagtgtcgtgctggatatcaaggtactcaacttcttcatgagcctggcaagacaaacagacagcaaa gaacatcaaataataaggagataa |
|
Protein
| Protein ID | pfu_aug1.0_13576.1_10622.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13576.1_10622.t1 MGAMPEHLKEGVLTPVLKKGKDKRLPSNYRGITVTTTVSKILEHTLHGRLNKQQDPTQSKLQRGFTAKTSPLNAAFMVSE AIAEKTDNKENVALVTLDAEKAFDRQIEENNLGTSIGTTKIGAPPVADDISMLPTTPLDTQVMLHTVSHNAELDKVNFNA IKIELIVYGIHKDEEPTLWELGRDQITSSTSTTHLGLVRQNNNKFIIEPKIQVARRTMYSLLGAGLHGRRGLNPLTSYRI WECFGLPRCTFGLECVKLTGKDIETMDKFQRGLLRQLQSLPDRRANIPVYSLVGAKPVSVVLDIKVLNFFMSLARQTDSK EHQIIRR |
|