Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13598.1_53983
Locus scaffold13598.1 : 23030 ... 30665 : -
To GenomeBrowser scaffold13598.1:23030..30665
Genes list of scaffold scaffold13598.1
Synonym pfu_aug2.0_701.1_04497

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_13598.1_53983.t1 2 1 COX16 12 78 5.7e-10 39.2 1.5e-13 5.7e-10 39.2
pfu_aug1.0_13598.1_53983.t1 2 2 COX16 79 93 5.7e-10 39.2 0.47 1700.0 -0.8

Transcript
Transcript IDpfu_aug1.0_13598.1_53983.t1
Definition-
>pfu_aug1.0_13598.1_53983.t1
atgataaatgaaatttccctgcaggtaattttgtttgctgcctacctgggtttaacagaaggacagaaacttcactttga
gaagaaagataaatcaaggaacatgattacagaagaggaaattaaagaatataagaaaaagatgaaaccaatgacacaaa
tatataaagaatacagaaaaagtgccgatctagattcctgggaaaatatccgaggaccaagaccttgggaagactcaaaa
actatgcaagatgaacagcggaagaatttgggtatgaaaaccagtgagtcccagtaa

Protein
Protein IDpfu_aug1.0_13598.1_53983.t1
Definition-
>pfu_aug1.0_13598.1_53983.t1
MINEISLQVILFAAYLGLTEGQKLHFEKKDKSRNMITEEEIKEYKKKMKPMTQIYKEYRKSADLDSWENIRGPRPWEDSK
TMQDEQRKNLGMKTSESQ

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