Gene
| Gene Model ID | pfu_aug1.0_1360.1_44000 |
|---|---|
| Locus | scaffold1360.1 : 87766 ... 92673 : + |
| To GenomeBrowser | scaffold1360.1:87766..92673 |
| Genes list of scaffold | scaffold1360.1 |
| Synonym | pfu_aug2.0_4036.1_22492 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1360.1_44000.t1 | 1 | 1 | TMEM187 | 11 | 256 | 0.0 | 216.3 | 0.0 | 0.0 | 216.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1360.1_44000.t1 | gi|291236929|ref|XP_002738391.1| | PREDICTED: transmembrane protein 187-like [Saccoglossus kowalevskii] | 3.00018e-42 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1360.1_44000.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1360.1_44000.t1 atgaccttggcaatgcttctacctttcaccattgttgccatggtaactctcataatgtctgtggtaacatatattggaac atttgatcatgtgaccacagagctcggaagcgatcactatgcagagaagtgtccagaatttttgtcgaaatttgtcccag aatccttcacgatgcctatgaatactttagtcaatattgggtacatcatggtcggagcatactacagtgctgtagctagt gtgcgatcaaagcagcaagacttcagtgcgcaagactgctttatgttctacttattcaactttggtgcagcattctatgg ggtcattcaaacactccgaattttgacccagatgcacaaatttgctgtcatggaccagtggtacactctgccactcttta tatttgtattcatctggagtaaaagtctaactgcaaatccacaaccaacacaaagtgcaatcatcatggcgctttctctc acaagctattcccttgctctattgactgaaattggatttgagattgctcttgctttccatatatttgtagctgttatagg aggtgtgacagcttatagaaaattttccgctacaagtgcaccaagggcattctttggagcgttacttagttgtgtaggat ttgtatttttgaaacttcttgacctagagctaccaaagtatcactcattgttcacttttatatcagggcatttcatatcg aaaattgctgatattttacagatatattatgtaaatgtttactttgaagctctcactttgcataagaacaaacttaaagc acaaaaatctgactaa |
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Protein
| Protein ID | pfu_aug1.0_1360.1_44000.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1360.1_44000.t1 MTLAMLLPFTIVAMVTLIMSVVTYIGTFDHVTTELGSDHYAEKCPEFLSKFVPESFTMPMNTLVNIGYIMVGAYYSAVAS VRSKQQDFSAQDCFMFYLFNFGAAFYGVIQTLRILTQMHKFAVMDQWYTLPLFIFVFIWSKSLTANPQPTQSAIIMALSL TSYSLALLTEIGFEIALAFHIFVAVIGGVTAYRKFSATSAPRAFFGALLSCVGFVFLKLLDLELPKYHSLFTFISGHFIS KIADILQIYYVNVYFEALTLHKNKLKAQKSD |
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