Gene
| Gene Model ID | pfu_aug1.0_13600.1_25182 |
|---|---|
| Locus | scaffold13600.1 : 20356 ... 29152 : + |
| To GenomeBrowser | scaffold13600.1:20356..29152 |
| Genes list of scaffold | scaffold13600.1 |
| Synonym | pfu_aug2.0_86.1_20206 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13600.1_25182.t1 | 3 | 1 | Ank | 3 | 18 | 9.3e-16 | 56.7 | 0.03 | 75.0 | 3.4 |
| pfu_aug1.0_13600.1_25182.t1 | 2 | 1 | Ank_2 | 3 | 84 | 1.3e-15 | 57.4 | 1.2e-17 | 3.0e-14 | 53.1 |
| pfu_aug1.0_13600.1_25182.t1 | 3 | 1 | Ank_3 | 3 | 14 | 1.9e-10 | 39.8 | 0.65 | 1600.0 | -0.2 |
| pfu_aug1.0_13600.1_25182.t1 | 3 | 1 | Ank_4 | 3 | 39 | 5.6e-10 | 39.4 | 4.9e-09 | 1.2e-05 | 25.6 |
| pfu_aug1.0_13600.1_25182.t1 | 2 | 1 | Ank_5 | 6 | 46 | 1.3e-11 | 44.3 | 9.6e-10 | 2.4e-06 | 27.6 |
| pfu_aug1.0_13600.1_25182.t1 | 3 | 2 | Ank | 20 | 47 | 9.3e-16 | 56.7 | 1.1e-09 | 2.7e-06 | 26.8 |
| pfu_aug1.0_13600.1_25182.t1 | 3 | 2 | Ank_3 | 20 | 47 | 1.9e-10 | 39.8 | 4.6e-07 | 0.0011 | 18.9 |
| pfu_aug1.0_13600.1_25182.t1 | 2 | 2 | Ank_5 | 51 | 87 | 1.3e-11 | 44.3 | 1.9e-05 | 0.048 | 13.9 |
| pfu_aug1.0_13600.1_25182.t1 | 3 | 3 | Ank | 54 | 85 | 9.3e-16 | 56.7 | 2.7e-08 | 6.6e-05 | 22.5 |
| pfu_aug1.0_13600.1_25182.t1 | 3 | 3 | Ank_3 | 54 | 81 | 1.9e-10 | 39.8 | 3.4e-06 | 0.0085 | 16.2 |
| pfu_aug1.0_13600.1_25182.t1 | 3 | 2 | Ank_4 | 56 | 86 | 5.6e-10 | 39.4 | 0.0016 | 4.1 | 8.0 |
| pfu_aug1.0_13600.1_25182.t1 | 2 | 1 | Death | 140 | 217 | 3.5e-06 | 26.6 | 2.4e-07 | 0.0006 | 19.5 |
| pfu_aug1.0_13600.1_25182.t1 | 2 | 2 | Ank_2 | 176 | 207 | 1.3e-15 | 57.4 | 0.95 | 2400.0 | -1.1 |
| pfu_aug1.0_13600.1_25182.t1 | 3 | 3 | Ank_4 | 188 | 207 | 5.6e-10 | 39.4 | 0.21 | 510.0 | 1.3 |
| pfu_aug1.0_13600.1_25182.t1 | 2 | 2 | Death | 274 | 329 | 3.5e-06 | 26.6 | 0.012 | 30.0 | 4.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13600.1_25182.t1 | gi|154421255|ref|XP_001583641.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 1.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13600.1_25182.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13600.1_25182.t1 atgaacgtagaaatcctgctgaagagaggcgcccaaacaaataagattgacaagcaaggacaaaccccgctacattacgc agccaagaaagattacgtggaccttattgagatgttggccgttcatggagctaatctggacttcccagaagagaaaacag gtcagagtgctttacacatggcagtgggtaagaactacctggctacagtacaaatactcatgttcagtggagctgatgtt aacgtcaaggataagaacgcggacattcccgcagcagttgcctcacatatacgaccaccgactcgggcacccacgatgct tcatacgagaacaccaagttctaggggaatcgactacagcaaggaggccaaaggggacccatccttcaaaggattcacaa acgatgttttcttgaaagagttaaccgacgatatggatgacgaatggtacaaggtgatcgttctgatgggctggccctat tatgacgtggaaaaagttatagaggatccaggtggatctcaaaaggaaaagatatggcattttttactccaatggagaaa ctcaaatagaacgcatgatgacttggggatggcgtcattgattacagctctgtccaaaggtgggaggcgagatatctgta ctacagtacaactcaaaatgagagaatggtctgcagttgagagcaatcagaaatctaagttctacagatggatagtgaaa gcattcaaagattcagatctgatgaatcctggtgactacccatatcctatgtgtgaccagttcctcgtattactggtgga gaacacccgagccaggtttgaggtcgccgataccttggacgtcccagaaccagatgtacagaaagtcatgaatgacaata catgcccaggacaagaacaaaagatgcttaagattctactaatggcaagggacagagagaaagatcaactagaagcgctc aaaactcttgtttacgccttagaatcgtctgaagtcgtttctggtaaacgatggatagttatggcttgtaataaatggtt ggaggacaataagaacagagaggaccctttttatggacaattggaatcgttcctccggactgttagtacctga |
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Protein
| Protein ID | pfu_aug1.0_13600.1_25182.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13600.1_25182.t1 MNVEILLKRGAQTNKIDKQGQTPLHYAAKKDYVDLIEMLAVHGANLDFPEEKTGQSALHMAVGKNYLATVQILMFSGADV NVKDKNADIPAAVASHIRPPTRAPTMLHTRTPSSRGIDYSKEAKGDPSFKGFTNDVFLKELTDDMDDEWYKVIVLMGWPY YDVEKVIEDPGGSQKEKIWHFLLQWRNSNRTHDDLGMASLITALSKGGRRDICTTVQLKMREWSAVESNQKSKFYRWIVK AFKDSDLMNPGDYPYPMCDQFLVLLVENTRARFEVADTLDVPEPDVQKVMNDNTCPGQEQKMLKILLMARDREKDQLEAL KTLVYALESSEVVSGKRWIVMACNKWLEDNKNREDPFYGQLESFLRTVST |
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