Gene
| Gene Model ID | pfu_aug1.0_13600.1_25184 |
|---|---|
| Locus | scaffold13600.1 : 32556 ... 39278 : + |
| To GenomeBrowser | scaffold13600.1:32556..39278 |
| Genes list of scaffold | scaffold13600.1 |
| Synonym | pfu_aug2.0_1575.1_18419 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13600.1_25184.t1 | 1 | 1 | PI-PLC-X | 72 | 185 | 9.3e-11 | 41.3 | 1.5e-14 | 2.2e-10 | 40.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13600.1_25184.t1 | gi|260804983|ref|XP_002597367.1| | hypothetical protein BRAFLDRAFT_260977 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_13600.1_25184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13600.1_25184.t1 atggctagtgccgtctacgactacgaaaactggatgggttcccttccagacagtcttcattctttaccattaaatcattt agctattccaggatcacatgacagcgcaagctacagcataaatgcaaagaatgacattgcccctgatacatcgccagaaa tacaagctctgatttcagttatgggggactgtgggaaggaaattatctatagatggagcctgtgtcaaaatctcaccatt acacaacagcttaaccatggcatacgctatctggatttgagagtttgctcacacaagaaaaagaagaccctgaactttat ccatgggctatatggggacgaagtcaagccagtccttaatgatatcaaccaatttctagacaagcaccggaaagaaatcg ttctgttggacttcaatcatttctattgtatggaccaaagcgatcacacagaactcatggacatgatacaagatgtattc gggagcaaactttgcccactccttgatatggaaagtgcaacattagagtctctatgggagaaccaactacaagttattgt tttctatcaaaatgatgctgcaaaggacaatcatttcttctggccagctacttccattaggtcgccatgggctaatactt ctcaactgtcaaatcttatgtcgtttcttgagtcgaactacaaagaaggacatcccgacgatatattttacgtgtggcaa ggagtacttactccaacaacagaaactgtcgtgatgcatttttgcagcagcttgaaggactgcctctgtaataaagttga tccaatttttgtatcctggttgaaagacaagcggagaggcaaaaacggaatcactatttgcaacatggactatgttgaaa cccccgattacatacctactattctttcgctaaacaaaatctga |
|
Protein
| Protein ID | pfu_aug1.0_13600.1_25184.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13600.1_25184.t1 MASAVYDYENWMGSLPDSLHSLPLNHLAIPGSHDSASYSINAKNDIAPDTSPEIQALISVMGDCGKEIIYRWSLCQNLTI TQQLNHGIRYLDLRVCSHKKKKTLNFIHGLYGDEVKPVLNDINQFLDKHRKEIVLLDFNHFYCMDQSDHTELMDMIQDVF GSKLCPLLDMESATLESLWENQLQVIVFYQNDAAKDNHFFWPATSIRSPWANTSQLSNLMSFLESNYKEGHPDDIFYVWQ GVLTPTTETVVMHFCSSLKDCLCNKVDPIFVSWLKDKRRGKNGITICNMDYVETPDYIPTILSLNKI |
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