Gene
| Gene Model ID | pfu_aug1.0_13615.1_61238 |
|---|---|
| Locus | scaffold13615.1 : 1 ... 57625 : + |
| To GenomeBrowser | scaffold13615.1:1..57625 |
| Genes list of scaffold | scaffold13615.1 |
| Synonym | pfu_aug2.0_470.1_00784 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13615.1_61238.t1 | 2 | 1 | LRR_8 | 5 | 43 | 1.7e-12 | 46.8 | 4.2e-08 | 8.8e-05 | 22.1 |
| pfu_aug1.0_13615.1_61238.t1 | 3 | 1 | LRR_4 | 9 | 51 | 3.1e-19 | 68.1 | 5.8e-12 | 1.2e-08 | 34.3 |
| pfu_aug1.0_13615.1_61238.t1 | 4 | 1 | LRR_1 | 10 | 30 | 2.6e-10 | 38.8 | 0.00075 | 1.6 | 9.0 |
| pfu_aug1.0_13615.1_61238.t1 | 1 | 1 | LRR_9 | 14 | 152 | 1.5e-15 | 57.1 | 3.5e-18 | 7.5e-15 | 54.9 |
| pfu_aug1.0_13615.1_61238.t1 | 4 | 2 | LRR_1 | 32 | 52 | 2.6e-10 | 38.8 | 4.4e-05 | 0.094 | 12.8 |
| pfu_aug1.0_13615.1_61238.t1 | 3 | 2 | LRR_4 | 53 | 97 | 3.1e-19 | 68.1 | 1.4e-11 | 3.0e-08 | 33.0 |
| pfu_aug1.0_13615.1_61238.t1 | 2 | 2 | LRR_8 | 54 | 112 | 1.7e-12 | 46.8 | 4.3e-10 | 9.0e-07 | 28.5 |
| pfu_aug1.0_13615.1_61238.t1 | 4 | 3 | LRR_1 | 55 | 71 | 2.6e-10 | 38.8 | 0.00031 | 0.65 | 10.2 |
| pfu_aug1.0_13615.1_61238.t1 | 3 | 3 | LRR_4 | 79 | 116 | 3.1e-19 | 68.1 | 2.7e-08 | 5.7e-05 | 22.6 |
| pfu_aug1.0_13615.1_61238.t1 | 4 | 4 | LRR_1 | 79 | 98 | 2.6e-10 | 38.8 | 0.0015 | 3.2 | 8.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13615.1_61238.t1 | gi|345777922|ref|XP_532047.3| | PREDICTED: centriolin isoform X3 [Canis lupus familiaris] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_13615.1_61238.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13615.1_61238.t1 tacattgaaaatctggatcgcctgaagagactgcaagtgctgaatctaagttcaaacatgatagaaaagattgagaagtt agaaaaactcctcaagctaagggagctaaatctgtcgtataataatatttcaaaaatcgagggacttgaaaatctaactt atttgcaagtgctaaacctgacggggaattacatagaacacattcctgtgtggatggggaaaagacttaaggcactacgt acattacacctgggaagaaacaacctgcaatctttgagtgagttggccaagttaaagccattaccagatctgacacagct gacaatagctgagaaccctgtagctggtctacctcactgccgactttacctggtgtttcacctgagaaccttagaggtcc tggatagtcagcccgtaacagagagagatagacaaggtgccagggagaggtttgaacaagctgaggaccgtttaaagcgg cttacagatgatctcatgggaacagagaggaagttgctacaagcaacgaaggatctgaaacgtatgggtgacatcaccga caaagacgatgttaaagttcagcttcgacaaagactggccaagaaaatgcaattggtcaatgagttacgagacagtgcta cccagatcgaggaagaaatcgacaagactcgtagttccatgcatcagaataaaatggacgtgtccagaattaagggccag ctggagagacttgatcctaaagatcctaaatacaaacgtttgtatgctgagatggtagataaagaacaacagatcagtga gagtaatcagatgtatggacaactacaacaacaactagaagtcatgttagataccatcgccagggaaacagacgacataa aaaaactggaacaacagctgaatgatgatcgagtagagagtaacgagtctctacgccaggagctggatgatattgtagga gggttacagggctacctggccagtgtcaaacagaaaggtctgaagtcacagagagactttgagagtttgttaggagagaa ggcgtcgctagaggagaaagtacgatctctggaacaggagcttagcgtactggatagtgaagctggcagagctcatagta tggaaatgcgtgtaaaagaactggaggacaccatatctagacaacaggaccataacagaactttagaggaccagattaac aagtcccgggccaaagacgtggagtaccaggaccgcatggagagtacatcacacgagctacaggccatgaaaagtgcact tagggacaccgaacgtaaagtacagaatgagaagatgactttagaaagacaagtacagacagagagggagaaggcacagc aagctatgagagacgccaaggccaaatctgctctggaggacgaggtcagaaggttacaaggtcaaattgaaggtcaaaag caacaaattgaggaggagagacggaagttgaacgagtccatacctcaacatgatctgaagagaagactgagagaattgtc acaaaatgttaaagctggcaggagtccaatcagtccacagagtgacagagattttgtcggtaaaactttccgagacctgc agcagtacattaatgatagtatgaacaagagtatgaatgacatggaacagatcaaacatacgaccagccaggcaaatgct gaaattcagacgttacgtgaaaacttacaacgagctgaggacaaactacataaacaggagaagaaggagaaaaataaaga aagcaagatggaggcagagaggaaggctgtatcagacgaactgagaaaacgtgacaatgagatacagaaacttaaggcgc tactgaaggaggaacaaaataaggcagctcagggaagacctgtgttcaaaattgtacatcgtccagattccgagtcagat cgtagctcattgaactctgaagaaaaagctctgtacgatgaactacaaaaagaacttctagaactaaggcgtagtatgag atctaaagaacaggaaaacgctaaacggcttgccgatgcagagaatgaggcagcgttactagaacagatggtgaaagaac aagaagacgagttgatgagaacacgagaggaaaatgaactagagagagagaagaatgaagctcgtatgcaggtaatagct caggatttggaccaggctaaacacacggccgatatgttacaaaatacgttagacgagagagatcgtaatctacatcaaca actcaaccatgctgatatgaacaaccagatgatcacggcacaagaagaggagctaacaaaactttacgatattcttgagg cccagaaagacgagatcggacacctgaatgtattactagatcagctggctaatcaaggagggggcggaacagttgcccca gctccaggatttgacgatgagttgtggcgtttacgacaggaagttaacagactgaaagaaaccctagcgatgcagtcagc atacgtacagagtcagggtcaaggtcaaggtggggcagccacacagactccaggatacgcctccactcagacccctggtt atgcctctgtacagactcctggatatgctgccactcagacatcagggcagggggcagcacctgttacttacataccagtc aatgctatagataatgcccagagaacaggtgctcctggagggtcaggacggatgtatctaccagcttattccacctcccc agaacgacctgctgggaggatgtactatcctgcccctgggggaggggcaccaccacctcctccacccccacaggcaggtg cagtgcttataggtccaccttctccaggccctagggtcagcttcctaccattggcacctatagctcagggcacgcccgtg gcacagagaagtcaaggattcaccaatgcatcaatgacagttccccctagtccaatagttgctggttcagtaggcattga cgcatcccagcctcgcggtatactgaaaaacgccgatacacagatgggagacgatacttacctcttctgtaacgtcccag aacaccatgatctggaggactacatagcagaattacaggagaaacttaaacgtctgaagacaaagctgttacaagaacag gagcttcaaagagaggctgaattagaagatgacagtcgattggtcagaagattgagaggagagttagaggcaagagatac tgtaagccagtttgatagcgcacaaaacaatctacgtagcaccgtacaggaaactaacgagctggaacgacgagccaacg aggcaggtgtagaactggttaaggcagcagatacactcagtgcaataaggtcagaggtcaaggacatggagaggaagaaa tccaaacaggagaggcttctaagggacataaatcaggtcatcaataagagagattccgagtacaaggatctggataacag agtcagatcagctacacagaatctacacagaatgcgggccgagttagactccacacagcagagagagaaggaaacggtgg cagccttacatgacgcagaggaagttctggctaaacggagaggagaaatagctcgcatgagagatcagattgagcaacaa aaacaggaactggagagacttgaccagaaaatgggcaagaagcaaacagaatatcaatttttacaagacacgatggaacg caaatctaacgaactcagtgctgccttaagggaggctgaggctgaagtcagtgctaaacagagagagggaaaggatttga aagacaggttgcaagaaatggaaatgcaaagaaatgacttaattcaattgataaaaaataaacgaatggaattaaataaa cggaaagaggaggtggaaactgaagatgaagtgctacaaaaacttgtgaactcagtgaataaacataaagcagaattaaa acacacttttgaaatgcaaaaattagaacattctgaactggaaaatttaaaatctcaacattctcaaaaactggcggagt tagaaaagacgcagagggaacttatagagtctgtagaagacaaaatggattcctccagtaaaaggctggaaaatgtagag gcagagttacgacagagagagaaagaactagacgatctaaatcaccaaaaaacagtcatgcagaaagagacacaaaccct caaactcacagtcaaagatactcgcaatgagctcaaaatcttaaaagatcacatcagggattcggaggaccaagtaaaag gcttagacacggaccttaaagagacgtaccataggagggacgaggctaagttagagtacgagagactgaacgaggccatt agacagagtagacttgctcatgatgattatatacgacaggagaaaagcaagcaatctgagttacaggaactcttgaaaaa tgtcaacgagaaatcaatagaatatcaagaggctaaaatgctggttagcaatgctaacttagaactggacaatatccgag ctgacctggagagtaaacgatttgaactggaacaggctaatacgtctgtcgtcagtttgaaggccaatgttggacaggat gacgactttgatgcagctcagaagaaggcaatgaagctgggtgctaaaaaggtaggcatctcctcagaagaaggcaatga agcttga |
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Protein
| Protein ID | pfu_aug1.0_13615.1_61238.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13615.1_61238.t1 YIENLDRLKRLQVLNLSSNMIEKIEKLEKLLKLRELNLSYNNISKIEGLENLTYLQVLNLTGNYIEHIPVWMGKRLKALR TLHLGRNNLQSLSELAKLKPLPDLTQLTIAENPVAGLPHCRLYLVFHLRTLEVLDSQPVTERDRQGARERFEQAEDRLKR LTDDLMGTERKLLQATKDLKRMGDITDKDDVKVQLRQRLAKKMQLVNELRDSATQIEEEIDKTRSSMHQNKMDVSRIKGQ LERLDPKDPKYKRLYAEMVDKEQQISESNQMYGQLQQQLEVMLDTIARETDDIKKLEQQLNDDRVESNESLRQELDDIVG GLQGYLASVKQKGLKSQRDFESLLGEKASLEEKVRSLEQELSVLDSEAGRAHSMEMRVKELEDTISRQQDHNRTLEDQIN KSRAKDVEYQDRMESTSHELQAMKSALRDTERKVQNEKMTLERQVQTEREKAQQAMRDAKAKSALEDEVRRLQGQIEGQK QQIEEERRKLNESIPQHDLKRRLRELSQNVKAGRSPISPQSDRDFVGKTFRDLQQYINDSMNKSMNDMEQIKHTTSQANA EIQTLRENLQRAEDKLHKQEKKEKNKESKMEAERKAVSDELRKRDNEIQKLKALLKEEQNKAAQGRPVFKIVHRPDSESD RSSLNSEEKALYDELQKELLELRRSMRSKEQENAKRLADAENEAALLEQMVKEQEDELMRTREENELEREKNEARMQVIA QDLDQAKHTADMLQNTLDERDRNLHQQLNHADMNNQMITAQEEELTKLYDILEAQKDEIGHLNVLLDQLANQGGGGTVAP APGFDDELWRLRQEVNRLKETLAMQSAYVQSQGQGQGGAATQTPGYASTQTPGYASVQTPGYAATQTSGQGAAPVTYIPV NAIDNAQRTGAPGGSGRMYLPAYSTSPERPAGRMYYPAPGGGAPPPPPPPQAGAVLIGPPSPGPRVSFLPLAPIAQGTPV AQRSQGFTNASMTVPPSPIVAGSVGIDASQPRGILKNADTQMGDDTYLFCNVPEHHDLEDYIAELQEKLKRLKTKLLQEQ ELQREAELEDDSRLVRRLRGELEARDTVSQFDSAQNNLRSTVQETNELERRANEAGVELVKAADTLSAIRSEVKDMERKK SKQERLLRDINQVINKRDSEYKDLDNRVRSATQNLHRMRAELDSTQQREKETVAALHDAEEVLAKRRGEIARMRDQIEQQ KQELERLDQKMGKKQTEYQFLQDTMERKSNELSAALREAEAEVSAKQREGKDLKDRLQEMEMQRNDLIQLIKNKRMELNK RKEEVETEDEVLQKLVNSVNKHKAELKHTFEMQKLEHSELENLKSQHSQKLAELEKTQRELIESVEDKMDSSSKRLENVE AELRQREKELDDLNHQKTVMQKETQTLKLTVKDTRNELKILKDHIRDSEDQVKGLDTDLKETYHRRDEAKLEYERLNEAI RQSRLAHDDYIRQEKSKQSELQELLKNVNEKSIEYQEAKMLVSNANLELDNIRADLESKRFELEQANTSVVSLKANVGQD DDFDAAQKKAMKLGAKKVGISSEEGNEA |
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