Gene
| Gene Model ID | pfu_aug1.0_1362.1_15442 |
|---|---|
| Locus | scaffold1362.1 : 18426 ... 39013 : + |
| To GenomeBrowser | scaffold1362.1:18426..39013 |
| Genes list of scaffold | scaffold1362.1 |
| Synonym | pfu_aug2.0_2240.1_02059 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1362.1_15442.t1 | 4 | 1 | Kelch_6 | 10 | 45 | 2.1e-11 | 43.5 | 0.00025 | 0.63 | 10.3 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 1 | Kelch_3 | 25 | 44 | 2.5e-14 | 52.9 | 0.00038 | 0.94 | 9.7 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 1 | Kelch_4 | 27 | 44 | 3.2e-14 | 52.4 | 0.00033 | 0.82 | 9.4 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 1 | Kelch_1 | 28 | 43 | 1.2e-08 | 34.3 | 0.0023 | 5.7 | 6.5 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 2 | Kelch_4 | 63 | 110 | 3.2e-14 | 52.4 | 1.9e-05 | 0.047 | 13.4 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 2 | Kelch_6 | 68 | 110 | 2.1e-11 | 43.5 | 0.0003 | 0.74 | 10.0 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 2 | Kelch_1 | 69 | 110 | 1.2e-08 | 34.3 | 6.5e-05 | 0.16 | 11.5 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 2 | Kelch_3 | 70 | 125 | 2.5e-14 | 52.9 | 0.00013 | 0.33 | 11.1 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 3 | Kelch_4 | 120 | 162 | 3.2e-14 | 52.4 | 6.9e-07 | 0.0017 | 18.0 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 3 | Kelch_6 | 133 | 162 | 2.1e-11 | 43.5 | 0.0053 | 13.0 | 6.1 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 3 | Kelch_1 | 133 | 158 | 1.2e-08 | 34.3 | 0.0054 | 13.0 | 5.3 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 3 | Kelch_3 | 134 | 164 | 2.5e-14 | 52.9 | 5.5e-06 | 0.014 | 15.5 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 4 | Kelch_6 | 188 | 222 | 2.1e-11 | 43.5 | 0.00012 | 0.28 | 11.4 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 4 | Kelch_4 | 201 | 224 | 3.2e-14 | 52.4 | 0.0018 | 4.4 | 7.1 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 4 | Kelch_1 | 207 | 223 | 1.2e-08 | 34.3 | 0.00069 | 1.7 | 8.2 |
| pfu_aug1.0_1362.1_15442.t1 | 4 | 4 | Kelch_3 | 209 | 253 | 2.5e-14 | 52.9 | 8.9e-05 | 0.22 | 11.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1362.1_15442.t1 | gi|241028751|ref|XP_002406352.1| | Muskelin, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1362.1_15442.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1362.1_15442.t1 atgtgccttgatccggagaggaagcagatatttaccctgggacggtatctggactccagtgtaaggtcaggggataatct caagagtgacttttatatgtatgatatcacttctgggaagtggacacttataacagaggatactcacgccatgggtggac ctaagctgatatttgaccaccaagtggctatcgacattgagagacaaactatttatgtgtttggaggacgtgttctcaca gggcctagtgagttaggggagaggggatcagagcctgaattcagtggattgtttgcctatcatgtacccacaaacacatg gaataaggtcatggatgactgctcacagttccggtcaaggatcggccactccatgttatttcatcctaggaggcggttac tgtacatatttgccggtcagaggtcaaaggagcacttaaatgacttcttcacatacaatgtggacagtggtcacatcgag gtcatcgctgatggctcaaagaaggactcccaaggggtgcctgctgcaggtttcactcaacgagcaactattgacccaga taaagatgaaatccatgtattatctggtctcagcaaggagaaggataaacgagataatgtaaagaattctttttgggtct acagtattgtcaaaaataaatggtcgtgtatttataagaatgagaattcaggtcaacaatactggacgaagatgcaacac gtggagcctgtaccgagatttgctcatcaacttgtctacgatcatattagaaaattatgtagactatccacagaacattt actacggagatgtaaatatttcattcggaagtacaagtttcaagagctggctggtgatagccctcggactgctatggttt acctgcaaaacgaattagcttctattgttgaccactcaaacagcaatgaaaggaaagagtttgaatgtttggcctctaca ttgtttaaagtaccagatatggaagaagaactgttcgaggaatcccacttggttgacatgacggaacatcatcagagcag aacggaactttttgacaagcttgtcaccttcttccccgataatatgactcaacctaaaggaaatctggtcgacttgatac ctctctactga |
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Protein
| Protein ID | pfu_aug1.0_1362.1_15442.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1362.1_15442.t1 MCLDPERKQIFTLGRYLDSSVRSGDNLKSDFYMYDITSGKWTLITEDTHAMGGPKLIFDHQVAIDIERQTIYVFGGRVLT GPSELGERGSEPEFSGLFAYHVPTNTWNKVMDDCSQFRSRIGHSMLFHPRRRLLYIFAGQRSKEHLNDFFTYNVDSGHIE VIADGSKKDSQGVPAAGFTQRATIDPDKDEIHVLSGLSKEKDKRDNVKNSFWVYSIVKNKWSCIYKNENSGQQYWTKMQH VEPVPRFAHQLVYDHIRKLCRLSTEHLLRRCKYFIRKYKFQELAGDSPRTAMVYLQNELASIVDHSNSNERKEFECLAST LFKVPDMEEELFEESHLVDMTEHHQSRTELFDKLVTFFPDNMTQPKGNLVDLIPLY |
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