Gene
| Gene Model ID | pfu_aug1.0_13622.1_61239 |
|---|---|
| Locus | scaffold13622.1 : 645 ... 13878 : - |
| To GenomeBrowser | scaffold13622.1:645..13878 |
| Genes list of scaffold | scaffold13622.1 |
| Synonym | pfu_aug2.0_1490.1_01669 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13622.1_61239.t1 | 1 | 1 | Peptidase_M24 | 3 | 180 | 1.4e-35 | 122.7 | 1.1e-39 | 1.7e-35 | 122.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13622.1_61239.t1 | gi|115638626|ref|XP_780497.2| | PREDICTED: methionine aminopeptidase 2 [Strongylocentrotus purpuratus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_13622.1_61239.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13622.1_61239.t1 accagaaagtacataaaggaatacatcaagccagggatgacaatgattgatatttgtgagacactggaagcaacatctag aaaaatgatcaatgagaatggactgaaggccggactggcatttcccacgggttgttctcttaatcactgtgcagctcact acacaccgaatgccggagatcccacaacgttaggtgttgatgatgtctgtaaaatagactttggaactcatattaatggc agaataattgattgtgctttcacattgacatttaatcctaagtatgacagattactacaggctgtgaaagatgctacaaa cacagggattaaggaagctggtattgatgttcgtttatgtgatattggagagagaatacaggaagtcatggagtcatatg aggtagaacttgaaggcaaaacttaccaagtgcgagcaataaggaacttgaatggccattcaataggtccatataggatc catgcaggaaaaactgtccccattgtcaaaggaggagatgctacacgtatggaggtaggccgtaccccgaaattccaaat tgttctgtga |
|
Protein
| Protein ID | pfu_aug1.0_13622.1_61239.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13622.1_61239.t1 TRKYIKEYIKPGMTMIDICETLEATSRKMINENGLKAGLAFPTGCSLNHCAAHYTPNAGDPTTLGVDDVCKIDFGTHING RIIDCAFTLTFNPKYDRLLQAVKDATNTGIKEAGIDVRLCDIGERIQEVMESYEVELEGKTYQVRAIRNLNGHSIGPYRI HAGKTVPIVKGGDATRMEVGRTPKFQIVL |
|