Gene
| Gene Model ID | pfu_aug1.0_13636.1_46664 |
|---|---|
| Locus | scaffold13636.1 : 7296 ... 12221 : + |
| To GenomeBrowser | scaffold13636.1:7296..12221 |
| Genes list of scaffold | scaffold13636.1 |
| Synonym | pfu_aug2.0_234.1_13846 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13636.1_46664.t1 | 1 | 1 | UCR_14kD | 73 | 150 | 6.9e-19 | 67.5 | 7.9e-23 | 1.2e-18 | 66.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13636.1_46664.t1 | gi|321472312|gb|EFX83282.1| | hypothetical protein DAPPUDRAFT_301847 [Daphnia pulex] | 2.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13636.1_46664.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13636.1_46664.t1 atgttgctttcggtggatccacccccttttttaatcgggatcgaaaatctactttcaatttcgagttttcatcaccaagg tcgaagcagccgtttttcttcaagttctgtaaaaatgtctacgagttacttacggcacgttataaagaatccttatgtta catcagccatgctttcagaagctaaaagacagttcttggttgaaaatccgggtttattgactgatttcagaacaaaagtt gccaaattttgttatgttcatcatggatttagcaaatacggtctatggagagacgatgttcgtaatgatataaaccccgt tgttcaggaggccattcgtcgtctaccccagtcactgatggaagagaggacgtacaggatttccagagcggaaattttat atatagctaaagctgaactacccaaggaagaatggacacagtgggaagatgtatga |
|
Protein
| Protein ID | pfu_aug1.0_13636.1_46664.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13636.1_46664.t1 MLLSVDPPPFLIGIENLLSISSFHHQGRSSRFSSSSVKMSTSYLRHVIKNPYVTSAMLSEAKRQFLVENPGLLTDFRTKV AKFCYVHHGFSKYGLWRDDVRNDINPVVQEAIRRLPQSLMEERTYRISRAEILYIAKAELPKEEWTQWEDV |
|