Gene
| Gene Model ID | pfu_aug1.0_1364.1_58462 |
|---|---|
| Locus | scaffold1364.1 : 18314 ... 29805 : - |
| To GenomeBrowser | scaffold1364.1:18314..29805 |
| Genes list of scaffold | scaffold1364.1 |
| Synonym | pfu_aug2.0_2364.1_15497 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1364.1_58462.t1 | 7 | 1 | LRR_6 | 57 | 70 | 1.4e-08 | 33.9 | 0.023 | 48.0 | 4.4 |
| pfu_aug1.0_1364.1_58462.t1 | 6 | 1 | LRR_8 | 59 | 115 | 4.9e-31 | 106.2 | 3.1e-11 | 6.7e-08 | 32.1 |
| pfu_aug1.0_1364.1_58462.t1 | 4 | 1 | LRR_4 | 59 | 73 | 5.4e-14 | 51.4 | 0.065 | 140.0 | 2.2 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 1 | LRR_7 | 59 | 74 | 2.8e-10 | 38.6 | 0.064 | 140.0 | 3.4 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 1 | LRR_1 | 60 | 76 | 1.7e-15 | 54.6 | 0.0074 | 16.0 | 6.0 |
| pfu_aug1.0_1364.1_58462.t1 | 4 | 2 | LRR_4 | 81 | 115 | 5.4e-14 | 51.4 | 2.4e-07 | 0.00051 | 19.5 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 2 | LRR_6 | 81 | 92 | 1.4e-08 | 33.9 | 0.0085 | 18.0 | 5.7 |
| pfu_aug1.0_1364.1_58462.t1 | 6 | 2 | LRR_8 | 82 | 145 | 4.9e-31 | 106.2 | 4.8e-14 | 1.0e-10 | 41.2 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 2 | LRR_1 | 82 | 103 | 1.7e-15 | 54.6 | 5.2e-05 | 0.11 | 12.5 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 2 | LRR_7 | 82 | 98 | 2.8e-10 | 38.6 | 0.0018 | 3.8 | 8.1 |
| pfu_aug1.0_1364.1_58462.t1 | 2 | 1 | LRR_5 | 82 | 190 | 2.7e-07 | 30.3 | 1.8e-05 | 0.038 | 13.6 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 3 | LRR_7 | 106 | 117 | 2.8e-10 | 38.6 | 0.048 | 100.0 | 3.8 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 3 | LRR_6 | 106 | 115 | 1.4e-08 | 33.9 | 0.075 | 160.0 | 2.8 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 3 | LRR_1 | 107 | 116 | 1.7e-15 | 54.6 | 0.02 | 43.0 | 4.7 |
| pfu_aug1.0_1364.1_58462.t1 | 6 | 3 | LRR_8 | 124 | 169 | 4.9e-31 | 106.2 | 3.5e-06 | 0.0073 | 16.0 |
| pfu_aug1.0_1364.1_58462.t1 | 2 | 2 | LRR_5 | 155 | 264 | 2.7e-07 | 30.3 | 3.1e-08 | 6.5e-05 | 22.6 |
| pfu_aug1.0_1364.1_58462.t1 | 4 | 3 | LRR_4 | 175 | 190 | 5.4e-14 | 51.4 | 0.0046 | 9.8 | 5.9 |
| pfu_aug1.0_1364.1_58462.t1 | 6 | 4 | LRR_8 | 177 | 191 | 4.9e-31 | 106.2 | 0.002 | 4.2 | 7.2 |
| pfu_aug1.0_1364.1_58462.t1 | 6 | 5 | LRR_8 | 183 | 245 | 4.9e-31 | 106.2 | 4.8e-15 | 1.0e-11 | 44.4 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 4 | LRR_1 | 183 | 208 | 1.7e-15 | 54.6 | 0.0078 | 16.0 | 5.9 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 4 | LRR_7 | 183 | 202 | 2.8e-10 | 38.6 | 0.032 | 67.0 | 4.3 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 4 | LRR_6 | 183 | 198 | 1.4e-08 | 33.9 | 0.33 | 710.0 | 0.8 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 5 | LRR_6 | 210 | 224 | 1.4e-08 | 33.9 | 0.016 | 34.0 | 4.9 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 5 | LRR_1 | 212 | 231 | 1.7e-15 | 54.6 | 0.002 | 4.2 | 7.7 |
| pfu_aug1.0_1364.1_58462.t1 | 4 | 4 | LRR_4 | 214 | 245 | 5.4e-14 | 51.4 | 4.8e-05 | 0.1 | 12.2 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 5 | LRR_7 | 214 | 225 | 2.8e-10 | 38.6 | 0.018 | 37.0 | 5.1 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 6 | LRR_7 | 234 | 247 | 2.8e-10 | 38.6 | 0.031 | 65.0 | 4.4 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 6 | LRR_6 | 234 | 245 | 1.4e-08 | 33.9 | 0.013 | 27.0 | 5.2 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 6 | LRR_1 | 235 | 253 | 1.7e-15 | 54.6 | 0.0084 | 18.0 | 5.8 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 7 | LRR_6 | 292 | 305 | 1.4e-08 | 33.9 | 0.055 | 120.0 | 3.2 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 7 | LRR_7 | 293 | 306 | 2.8e-10 | 38.6 | 0.008 | 17.0 | 6.1 |
| pfu_aug1.0_1364.1_58462.t1 | 6 | 6 | LRR_8 | 294 | 310 | 4.9e-31 | 106.2 | 0.0027 | 5.7 | 6.7 |
| pfu_aug1.0_1364.1_58462.t1 | 7 | 7 | LRR_1 | 294 | 308 | 1.7e-15 | 54.6 | 0.011 | 24.0 | 5.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1364.1_58462.t1 | gi|260787625|ref|XP_002588853.1| | hypothetical protein BRAFLDRAFT_99565 [Branchiostoma floridae] | 3.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_1364.1_58462.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1364.1_58462.t1 atgcttgaaagagtattgctgtttctcttgatcttgccagagttggtaattagcagtaaggaacatcatacttgcgctac ggaaaccagatgtcagtgtgttccaataaacaaaattgaattccgtgcgatatgctcacacatcggcctccagaatgctc caaaattcaactccagcgttacagagatagatttgtcttacaataagtttgcacagtttcctaaaaacaccagtcttcct aagaatttacgttacttggacatctctcaaaaccggtacatgagttctattcccgcaggttcatttgatcgaatgtctcg tctggaatatcttgacttgtcaggttcttatgaggaacttggttcctcagtattgactcctggaatatttaaagcgctga aatccctcccatttcttaatctcaagaacagtaaccctaatgataggtcgtacccagaaaaggcattttctgatctagct tccgtagaaactcttcttctcaatggcaaacaaaacggattcggacaagttttcgcaaatatggaaaagctgaagaaatt ggatatttcaggttatgggggacattgtgatcttagttacataccaaccgagtacttccgtaacgtttcgcatatttcag ttctggacatatcagattgtcgacttaaaaacttgtaccaaggaaccttctcgtacataacatctctacaagacttgaat ttatctaagaatgaggaactatcattcagtataatgagaaacttaacatctgatctgaaattcaccaaaatagagaagct aagaataagcaagattcattgtacctttggattaggtaccgagatattaagggacgatatgaggaatctacaaaatacaa gcttaaaagaactgtatatagacagcaaccgcatagaacgtatgcagacagaactatctccgacgcttacacatcaactg gacgtcatcagcaagcgcagggatagagcggaaatcaagctcacaggaattctgtccactaatgatgctctactatttta cgtcattgtcgccgacagacgacggacgatcactgttgtcaagacaacatattcatcattcgttcaactgcagcatcata ccccagccaccctgctacgtctttcggtacgctttttcgacatgtacttcatgtcaaacagtttaaataaagccgaagtg aattttcctggcgccatctacaatgcagaattttaa |
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Protein
| Protein ID | pfu_aug1.0_1364.1_58462.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1364.1_58462.t1 MLERVLLFLLILPELVISSKEHHTCATETRCQCVPINKIEFRAICSHIGLQNAPKFNSSVTEIDLSYNKFAQFPKNTSLP KNLRYLDISQNRYMSSIPAGSFDRMSRLEYLDLSGSYEELGSSVLTPGIFKALKSLPFLNLKNSNPNDRSYPEKAFSDLA SVETLLLNGKQNGFGQVFANMEKLKKLDISGYGGHCDLSYIPTEYFRNVSHISVLDISDCRLKNLYQGTFSYITSLQDLN LSKNEELSFSIMRNLTSDLKFTKIEKLRISKIHCTFGLGTEILRDDMRNLQNTSLKELYIDSNRIERMQTELSPTLTHQL DVISKRRDRAEIKLTGILSTNDALLFYVIVADRRRTITVVKTTYSSFVQLQHHTPATLLRLSVRFFDMYFMSNSLNKAEV NFPGAIYNAEF |
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