Gene
| Gene Model ID | pfu_aug1.0_136409.1_21188 |
|---|---|
| Locus | scaffold136409.1 : 1 ... 965 : - |
| To GenomeBrowser | scaffold136409.1:1..965 |
| Genes list of scaffold | scaffold136409.1 |
| Synonym | pfu_aug2.0_300.1_00579 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_136409.1_21188.t1 | 1 | 1 | Ifi-6-16 | 74 | 152 | 3.3e-22 | 78.0 | 3.4e-26 | 5.1e-22 | 77.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_136409.1_21188.t1 | gi|354494599|ref|XP_003509424.1| | 2.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_136409.1_21188.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_136409.1_21188.t1 atgtgtctcgttggtttatatgttgtcttttatgttcgatgtttgatgtcttgtttactgttccttgtctcttgctgtgt cttctctgtgttttcacttggggtgtttgtgtgctgctgttggtgctgcaacccgagtcttgttggagctcccctccttt cttatgtaaagaaggagactgtattttcagatggtgatggcttttggacgttcgtgggcgcggttgccgcaggggccgga gcagtggtagcggcaccggtagctctaacagtcgctggattcacgggcgccgggataacggcgggatctgttggagccag tctgatgtccgcgtcagccattgctaacggagggggtgtggccgcagggggcgtggtcgccactctacagtccatgggag cggtcggacttggagttggtgccaaagctgccgtgggaaccgctggaggggctgcatatgccgcatggaaaggaagatca tctgatgattaa |
|
Protein
| Protein ID | pfu_aug1.0_136409.1_21188.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_136409.1_21188.t1 MCLVGLYVVFYVRCLMSCLLFLVSCCVFSVFSLGVFVCCCWCCNPSLVGAPLLSYVKKETVFSDGDGFWTFVGAVAAGAG AVVAAPVALTVAGFTGAGITAGSVGASLMSASAIANGGGVAAGGVVATLQSMGAVGLGVGAKAAVGTAGGAAYAAWKGRS SDD |
|