Gene
| Gene Model ID | pfu_aug1.0_13646.1_39531 |
|---|---|
| Locus | scaffold13646.1 : 35476 ... 40904 : + |
| To GenomeBrowser | scaffold13646.1:35476..40904 |
| Genes list of scaffold | scaffold13646.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13646.1_39531.t1 | 3 | 1 | SpoU_methylase | 226 | 314 | 3.7e-12 | 46.3 | 5.6e-15 | 4.2e-11 | 42.9 |
| pfu_aug1.0_13646.1_39531.t1 | 3 | 2 | SpoU_methylase | 378 | 394 | 3.7e-12 | 46.3 | 0.52 | 3900.0 | -2.4 |
| pfu_aug1.0_13646.1_39531.t1 | 3 | 3 | SpoU_methylase | 403 | 427 | 3.7e-12 | 46.3 | 0.089 | 660.0 | 0.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13646.1_39531.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13646.1_39531.t1 atggctgcgctcatgggaaaagtgaaagtagaagttcttcgatgggctttttcacctgtttgctgtcaagtgagacatgc acgcccgggacacatacgtaggagaccagtgaaagtgttagagagcgaagaaaaatacaaccctcatcctgatattttgg aaagaacagatgatgatccttttatacgtagccccaagactaagcagaacaataagcatttcaaaggcaccaaacaacga tcagataccaaaatttctgagaccttgaacaggaaaaattttatgggaatcgaatatgttactgtacctcttaatgtttc aatgcaagaaaagtcaagaatgtttggagataaacttacagctgcacggagttataaaatgaggaaatcagagagacttt tagtactcgagggatttacacccatttttggtgcactgactgctggggtagaaatggatactctcctgttcaccaaagag gagcagcttaaagctctctcaaagactttcaattccttgtcaccgtgcaacgatcacagtaacgcaaatttctatcaact tcaatcaaggcaaatggaagtgtactcagacatgacagaatcacacggtctcctaggaattttccaaattccaaaaaccg gagagtgtcctagtatgccaaaagacgtgctgccacttacagttgtactagacaacatcaaggactccatggacatgggc atgcttatacgttccatatctgcggtgggagcacagagactgatcgtacttaaagattgtgttgatatttgggataaatc cgcaataagatctgcctggggagggcacttcagagttcctttgtacacagatgtggaatggcatgaattacagaactaca tccagattgatggaaatgccacgtttctgacatcgtccagaagtagtatactcaagaaacttcagagagagatcgattca aaaacgccagaacaattagatgagctcattgatagcctagaaattgatgatagtttagatgaagacgaagaggacaatga tgatgatgatgatgttgacaatgaaaagttttcagtagctcctatttttagcaaattattttacagtgttgattatagtc agttttcacatgtgactcttgttataacaggtgagaagtataatataggtgctcagtgtcgtaagtttctgtttaggaac aatggtcaaggggtgtccttgccgatggccgacaatgcaaagggagttaactcagctgtaggtggcagtgttgttcttta tgaaattcaaagacagtttgcagaaaaaagaaaaacagattgtgaataa |
|
Protein
| Protein ID | pfu_aug1.0_13646.1_39531.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13646.1_39531.t1 MAALMGKVKVEVLRWAFSPVCCQVRHARPGHIRRRPVKVLESEEKYNPHPDILERTDDDPFIRSPKTKQNNKHFKGTKQR SDTKISETLNRKNFMGIEYVTVPLNVSMQEKSRMFGDKLTAARSYKMRKSERLLVLEGFTPIFGALTAGVEMDTLLFTKE EQLKALSKTFNSLSPCNDHSNANFYQLQSRQMEVYSDMTESHGLLGIFQIPKTGECPSMPKDVLPLTVVLDNIKDSMDMG MLIRSISAVGAQRLIVLKDCVDIWDKSAIRSAWGGHFRVPLYTDVEWHELQNYIQIDGNATFLTSSRSSILKKLQREIDS KTPEQLDELIDSLEIDDSLDEDEEDNDDDDDVDNEKFSVAPIFSKLFYSVDYSQFSHVTLVITGEKYNIGAQCRKFLFRN NGQGVSLPMADNAKGVNSAVGGSVVLYEIQRQFAEKRKTDCE |
|