Gene
Gene Model ID | pfu_aug1.0_13650.1_68662 |
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Locus | scaffold13650.1 : 5706 ... 11119 : + |
To GenomeBrowser | scaffold13650.1:5706..11119 |
Genes list of scaffold | scaffold13650.1 |
Synonym | pfu_aug2.0_11482.1_09808 |
Manual annotation
Study field | Reproduction |
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Gene name | WNT1-inducible-signaling pathway protein 1-like |
Description | best hit to WNT1-inducible-signaling pathway protein 1-like,Insulin-like growth factor binding protein domain |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_13650.1_68662.t1 | 4 | 1 | TSP_1 | 12 | 18 | 3.4e-06 | 27.0 | 0.31 | 2300.0 | -1.2 |
pfu_aug1.0_13650.1_68662.t1 | 2 | 1 | IGFBP | 14 | 65 | 9.5e-11 | 42.0 | 1.3e-14 | 9.5e-11 | 42.0 |
pfu_aug1.0_13650.1_68662.t1 | 4 | 2 | TSP_1 | 52 | 65 | 3.4e-06 | 27.0 | 0.82 | 6100.0 | -2.6 |
pfu_aug1.0_13650.1_68662.t1 | 4 | 3 | TSP_1 | 85 | 95 | 3.4e-06 | 27.0 | 0.19 | 1400.0 | -0.6 |
pfu_aug1.0_13650.1_68662.t1 | 2 | 2 | IGFBP | 88 | 122 | 9.5e-11 | 42.0 | 0.54 | 4000.0 | -1.6 |
pfu_aug1.0_13650.1_68662.t1 | 4 | 4 | TSP_1 | 96 | 132 | 3.4e-06 | 27.0 | 4.5e-10 | 3.4e-06 | 27.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_13650.1_68662.t1 | gi|194215125|ref|XP_001498849.2| | PREDICTED: WNT1-inducible-signaling pathway protein 1 [Equus caballus] | 2.0e-17 |
Transcript
Transcript ID | pfu_aug1.0_13650.1_68662.t1 |
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Definition | - |
>pfu_aug1.0_13650.1_68662.t1 atgaacagaaattgtctttttcagaagtctgtgaacgagtgtgacaagccttgtccacgttgtccgttacagcaatgcca ggacggtgtttccatggttctggacggatgtgggtgttgctacatgtgcgcacgacaacatggcgacctgtgtacaagaa gagccaactgtgatactttcaagggactacattgtgacattccgaggcgcatgagtaatggattgtgccgatgaccacgt gatgttgacatccagagtgccgagccacagtgtacagacgagaaatctgattggtcaaggtgttcggtgacgtgtggagt aggaatttctttccgatataaaccaagaagctgtggcaaagagaaggaaacccgactctgttacctgaggccgtgtatgg acaacgcattgtattctttgatatcaaaatttggacttcatgatttttaccgacatgttttacctacttttctgaaaatt tag |
Protein
Protein ID | pfu_aug1.0_13650.1_68662.t1 |
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Definition | - |
>pfu_aug1.0_13650.1_68662.t1 MNRNCLFQKSVNECDKPCPRCPLQQCQDGVSMVLDGCGCCYMCARQHGDLCTRRANCDTFKGLHCDIPRRMSNGLCRXPR DVDIQSAEPQCTDEKSDWSRCSVTCGVGISFRYKPRSCGKEKETRLCYLRPCMDNALYSLISKFGLHDFYRHVLPTFLKI |