Gene
| Gene Model ID | pfu_aug1.0_1371.1_36985 |
|---|---|
| Locus | scaffold1371.1 : 36296 ... 42089 : + |
| To GenomeBrowser | scaffold1371.1:36296..42089 |
| Genes list of scaffold | scaffold1371.1 |
| Synonym | pfu_aug2.0_5749.1_32823 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1371.1_36985.t1 | 5 | 1 | zf-C2H2 | 10 | 31 | 1.6e-07 | 31.2 | 9.2e-05 | 0.19 | 12.1 |
| pfu_aug1.0_1371.1_36985.t1 | 5 | 2 | zf-C2H2 | 42 | 64 | 1.6e-07 | 31.2 | 0.016 | 34.0 | 5.0 |
| pfu_aug1.0_1371.1_36985.t1 | 5 | 3 | zf-C2H2 | 70 | 92 | 1.6e-07 | 31.2 | 4.2e-08 | 8.9e-05 | 22.6 |
| pfu_aug1.0_1371.1_36985.t1 | 5 | 4 | zf-C2H2 | 97 | 115 | 1.6e-07 | 31.2 | 0.18 | 370.0 | 1.7 |
| pfu_aug1.0_1371.1_36985.t1 | 5 | 5 | zf-C2H2 | 133 | 154 | 1.6e-07 | 31.2 | 7.4e-05 | 0.16 | 12.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1371.1_36985.t1 | gi|270005214|gb|EFA01662.1| | 2.0e-11 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1371.1_36985.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1371.1_36985.t1 atgaagttccacaataaagagttgttatgccatctctgctctaagtgctgtagtactaaaactgatctagcagtacattt gtatacaaatcatgacatagtgtcaccaaatctacgtttacgtcagtgtccacattgtgattttaagcattacagtagct gggcattcaagtcacatgtggcctcaaaacacggtggtaccaaagactttgtgtgtaaggaatgtggcaaggaattctat gcatcaaagaacctgtatgatcacatgaagatacacattggtaagaagtaccattgtccagtggaggggtgtaccttcac cactatctataagtctgccctctatagatgtcatgtccctactgtacatacagaaaaggacattaagaacagcatgtgcc acctgtgtgactatcgttgtaagaacaatcatgcattgaaaacacatatacgactaaaacacaacgtgaatctgacggga ccggagataaaacagatccaggcacggcttcacgcccctgtggtggaggaagggaccgttatactgcctgctaggactaa tcatgtacttgatgatctgacatcacagcagctagagacagacactgtgaatgtacctggtccaatagatttactgttat cttga |
|
Protein
| Protein ID | pfu_aug1.0_1371.1_36985.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1371.1_36985.t1 MKFHNKELLCHLCSKCCSTKTDLAVHLYTNHDIVSPNLRLRQCPHCDFKHYSSWAFKSHVASKHGGTKDFVCKECGKEFY ASKNLYDHMKIHIGKKYHCPVEGCTFTTIYKSALYRCHVPTVHTEKDIKNSMCHLCDYRCKNNHALKTHIRLKHNVNLTG PEIKQIQARLHAPVVEEGTVILPARTNHVLDDLTSQQLETDTVNVPGPIDLLLS |
|