Gene
| Gene Model ID | pfu_aug1.0_1371.1_36987 |
|---|---|
| Locus | scaffold1371.1 : 68526 ... 74641 : + |
| To GenomeBrowser | scaffold1371.1:68526..74641 |
| Genes list of scaffold | scaffold1371.1 |
| Synonym | pfu_aug2.0_1271.1_04934 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1371.1_36987.t1 | 5 | 1 | LRR_1 | 15 | 24 | 4.6e-06 | 25.9 | 0.43 | 920.0 | 0.6 |
| pfu_aug1.0_1371.1_36987.t1 | 6 | 1 | LRR_8 | 73 | 105 | 2.3e-10 | 40.0 | 0.044 | 93.0 | 2.8 |
| pfu_aug1.0_1371.1_36987.t1 | 4 | 1 | LRR_4 | 73 | 105 | 3.3e-10 | 39.3 | 0.0063 | 13.0 | 5.4 |
| pfu_aug1.0_1371.1_36987.t1 | 4 | 2 | LRR_4 | 156 | 176 | 3.3e-10 | 39.3 | 0.096 | 200.0 | 1.7 |
| pfu_aug1.0_1371.1_36987.t1 | 6 | 2 | LRR_8 | 166 | 179 | 2.3e-10 | 40.0 | 0.24 | 520.0 | 0.5 |
| pfu_aug1.0_1371.1_36987.t1 | 6 | 3 | LRR_8 | 195 | 230 | 2.3e-10 | 40.0 | 0.025 | 52.0 | 3.6 |
| pfu_aug1.0_1371.1_36987.t1 | 6 | 4 | LRR_8 | 195 | 259 | 2.3e-10 | 40.0 | 1.7e-06 | 0.0036 | 17.0 |
| pfu_aug1.0_1371.1_36987.t1 | 5 | 2 | LRR_1 | 195 | 203 | 4.6e-06 | 25.9 | 0.35 | 740.0 | 0.9 |
| pfu_aug1.0_1371.1_36987.t1 | 4 | 3 | LRR_4 | 240 | 264 | 3.3e-10 | 39.3 | 4.2e-06 | 0.0089 | 15.6 |
| pfu_aug1.0_1371.1_36987.t1 | 6 | 5 | LRR_8 | 241 | 284 | 2.3e-10 | 40.0 | 6.6e-11 | 1.4e-07 | 31.1 |
| pfu_aug1.0_1371.1_36987.t1 | 5 | 3 | LRR_1 | 248 | 265 | 4.6e-06 | 25.9 | 0.00055 | 1.2 | 9.4 |
| pfu_aug1.0_1371.1_36987.t1 | 6 | 6 | LRR_8 | 273 | 307 | 2.3e-10 | 40.0 | 1.5e-06 | 0.0032 | 17.1 |
| pfu_aug1.0_1371.1_36987.t1 | 4 | 4 | LRR_4 | 273 | 310 | 3.3e-10 | 39.3 | 9.3e-08 | 0.0002 | 20.9 |
| pfu_aug1.0_1371.1_36987.t1 | 5 | 4 | LRR_1 | 273 | 290 | 4.6e-06 | 25.9 | 3.4e-05 | 0.072 | 13.1 |
| pfu_aug1.0_1371.1_36987.t1 | 5 | 5 | LRR_1 | 296 | 310 | 4.6e-06 | 25.9 | 0.032 | 67.0 | 4.1 |
| pfu_aug1.0_1371.1_36987.t1 | 1 | 1 | TIR | 436 | 569 | 6.4e-23 | 80.7 | 6.3e-26 | 1.3e-22 | 79.7 |
| pfu_aug1.0_1371.1_36987.t1 | 1 | 1 | TIR_2 | 437 | 543 | 2.2e-11 | 43.8 | 2.0e-14 | 4.2e-11 | 42.8 |
Transcript
| Transcript ID | pfu_aug1.0_1371.1_36987.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1371.1_36987.t1 atggatattcttaagtatttacatggattacgtgacatgaagttagatgtaatggatatcagtggaaacaactggtattc ctacagaaaacacttcctgagaaaaaaggacttagaaaatctcctgaccatgtgcgtgaaggaaatcaatataggttaca gttatatatactactttccattcatggatgctctaggttctaatttctcaaaatgcttgcagaaactggtggtcaaggca aacagaatcgtttggacagtcgaagaaataatcgggctcatctctcttccatcgattaaatatttggacatatctatccc aacaattatgaaatctgaagtaaaacaattgaggaataagaatttgctttttaaaccagttagcgagcatgtaaatgtaa gaacgtatggactaaagacaatagaatatgctgatttgtccggagtaactttgaatgatggaatattaagttcaaacagt ttgatttattactctattatttttgatatgccaaatctgaagacactaaagtctgcatatacgtctgttgaaatatgtaa cttcgacaattatttcaaaggaaatctttcttatctggatatgtcgggctggaactgctatatggtgaatccaagattct ttcagagacacaacaaactcaaaattctgcatgcatcatcctcgcaaatcggactatttatcaacagaaagagacatttg tctttatttaagggtctatcaaatctggaaatgttagatatttcattcaatcgcataaaacattttagtgacatcttttt tgaggaccaaatccattccctgcgatacctgaatttgagtcataacatgctacgaagaattccagtggcaatcttggcct tgtcgaaactcattactatcgattttagctataatcagtttgaatattttgacaaacacgacagacacattattgaatca ttgaaaaacacagccttcagttttggcgggaatggttttgaatgtagctgtagatacgttgatagcttggtatggatgag tacatctagaaacatacaaaatcttgcttgtaaagacggcaatattactgatattttgttaaaaattcgtaacttccggt tgaaatgtctatctgcattttggttggatctttctgtggtttcgatattgttcatcatcattgtaatagtgttggttgga ataggctaccgtaataaagcattggtgatctacctctatataaaagctagacgtatgataaagaaagccaatgtccagag tgaccgtaggcaatattcttatgatgcctttgtatcatattctcatatggatgaagattgggtaaccggacccttgtttc agtacttgaacaatgatctttccctgcaaatatgtatacatcataaggactttgtaccaggtgaaccaattgctgaggaa attcttagatgtatagatgccagcagaaaatctgtttttgtcatcaccaggaactttctggctagtgaatggagtttgtt tgagatggacatagcaaggcgccatgtgtttcagagtgacagcgacacaatattggttatactaaaagacgacattcccg ttcacgagatgccaaacttactgaagaaaatatggtggcgaatcgtatgtctaaagtttccacaaaaggaagatccctcg gaaattgaaatgttctggagaaaactatcggatgtattcaatactgaatga |
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Protein
| Protein ID | pfu_aug1.0_1371.1_36987.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1371.1_36987.t1 MDILKYLHGLRDMKLDVMDISGNNWYSYRKHFLRKKDLENLLTMCVKEINIGYSYIYYFPFMDALGSNFSKCLQKLVVKA NRIVWTVEEIIGLISLPSIKYLDISIPTIMKSEVKQLRNKNLLFKPVSEHVNVRTYGLKTIEYADLSGVTLNDGILSSNS LIYYSIIFDMPNLKTLKSAYTSVEICNFDNYFKGNLSYLDMSGWNCYMVNPRFFQRHNKLKILHASSSQIGLFINRKRHL SLFKGLSNLEMLDISFNRIKHFSDIFFEDQIHSLRYLNLSHNMLRRIPVAILALSKLITIDFSYNQFEYFDKHDRHIIES LKNTAFSFGGNGFECSCRYVDSLVWMSTSRNIQNLACKDGNITDILLKIRNFRLKCLSAFWLDLSVVSILFIIIVIVLVG IGYRNKALVIYLYIKARRMIKKANVQSDRRQYSYDAFVSYSHMDEDWVTGPLFQYLNNDLSLQICIHHKDFVPGEPIAEE ILRCIDASRKSVFVITRNFLASEWSLFEMDIARRHVFQSDSDTILVILKDDIPVHEMPNLLKKIWWRIVCLKFPQKEDPS EIEMFWRKLSDVFNTE |
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