Gene
| Gene Model ID | pfu_aug1.0_1371.1_36990 |
|---|---|
| Locus | scaffold1371.1 : 106816 ... 117014 : + |
| To GenomeBrowser | scaffold1371.1:106816..117014 |
| Genes list of scaffold | scaffold1371.1 |
| Synonym | pfu_aug2.0_1271.1_04931 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1371.1_36990.t1 | 2 | 1 | PBP | 21 | 85 | 1.3e-08 | 34.7 | 2.1e-11 | 1.5e-07 | 31.3 |
| pfu_aug1.0_1371.1_36990.t1 | 2 | 2 | PBP | 140 | 161 | 1.3e-08 | 34.7 | 0.014 | 110.0 | 2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1371.1_36990.t1 | gi|261289747|ref|XP_002604850.1| | hypothetical protein BRAFLDRAFT_70702 [Branchiostoma floridae] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_1371.1_36990.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1371.1_36990.t1 atggcacccacgatatcatgggaaccacataatggtacatacaccgtggtcatattgagcgtgggtgttccaatcaacca tgggatttatatcaatattccaggaaatagatttgctgacgctgaggtcatcaacatagtgaaaggtgacctatctactg gtgacgtggtcatgccgtatgccggacctatgccaggggacagtacctcacattactattacttcttactatatgaacag gcaatgaagctaaatgccagtaatatgatgggctatacagatccaccgggaggaaggtttctcttcaacatatccggttt tgttgctgacagccatttaacattgactggagcaacatggtttataaccacgcaggatgaatatgtaagatataactacg tcacgtatcggggtcgtaaccaggacgacgtgtgtaacggtgtacaaggttacagtaatccatgtccaacatcaaaagct acaataaactataccagatgggttcttatattcattttgatgtgtacttttattttcaatcaacgctttgaagtataa |
|
Protein
| Protein ID | pfu_aug1.0_1371.1_36990.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1371.1_36990.t1 MAPTISWEPHNGTYTVVILSVGVPINHGIYINIPGNRFADAEVINIVKGDLSTGDVVMPYAGPMPGDSTSHYYYFLLYEQ AMKLNASNMMGYTDPPGGRFLFNISGFVADSHLTLTGATWFITTQDEYVRYNYVTYRGRNQDDVCNGVQGYSNPCPTSKA TINYTRWVLIFILMCTFIFNQRFEV |
|