Gene
| Gene Model ID | pfu_aug1.0_13726.1_68670 |
|---|---|
| Locus | scaffold13726.1 : 14416 ... 17270 : + |
| To GenomeBrowser | scaffold13726.1:14416..17270 |
| Genes list of scaffold | scaffold13726.1 |
| Synonym | pfu_aug2.0_1545.1_18395 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13726.1_68670.t1 | 1 | 1 | Ets | 80 | 161 | 2.9e-33 | 113.8 | 3.3e-37 | 4.9e-33 | 113.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_13726.1_68670.t1 | gi|13936818|gb|AAK49950.1|AF339838_1 | ets variant gene 6 protein [Danio rerio] | 8.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| trochophore | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13726.1_68670.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13726.1_68670.t1 atgaccggaggagtggaggccgacagtgactccgaccctgacgacgcctccgagacagaaggagtgttgagtcccgcccc cagtgcctcggatccggagtccctatctgataacgaagagaacagcagtcaaacggaccagaaccatggaagtgacatgc gcttgagctatatgggaaatgtaaacggctcggattcaatgtcgtatccacgcattaaacaagactcagattgtcgtctg ctgtgggaattcatccaccagttgttacagaatccatgttacaaggactacgtgtgctgggagaagcaggacgagtatgt cttcaggatcaataatcctatgggattagcccaactctggggacaccagaaaaacaggtccaatatgacgtacgagaaac tgtcccgagcactacggtactactacagaatgaatatcatcaagaaagtgtctggcaaaagactcacctacaagtttatg cagcctccgtccaacattcagaaaggacaacgtggggcgaaacctcacagtaaatcttgtctttcaacatccatatcaaa cttaaaacaggaagtgacagagtcgtctgtagcctcaaatggtgatagacctgtagagcgtgccatatcatatcctataa acactccatcgattcacagacccttacctttacttccaaccctcgataggagtccgattaaatcagaagtcccaaatttt tgtgatttttcttcaccaaacaacgaagtttttagactatcgccgtctatgagcaaagagttcccaaaaagtccagcaga agagttagttacatcaccctttccaccaaatttgatcaacgctcatacaaacgctttatcggttaaacgggaaccaggaa tggatgaagcacatgattttacaatgactacattaaaacgaaaagaacgattgagtcaagagtccgaccagggtcatagt acatcgagttctcccgtgcaaaacaacgaatccagattacccttgcttttaaatttcatacaagatagatcgccatcaag ctga |
|
Protein
| Protein ID | pfu_aug1.0_13726.1_68670.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13726.1_68670.t1 MTGGVEADSDSDPDDASETEGVLSPAPSASDPESLSDNEENSSQTDQNHGSDMRLSYMGNVNGSDSMSYPRIKQDSDCRL LWEFIHQLLQNPCYKDYVCWEKQDEYVFRINNPMGLAQLWGHQKNRSNMTYEKLSRALRYYYRMNIIKKVSGKRLTYKFM QPPSNIQKGQRGAKPHSKSCLSTSISNLKQEVTESSVASNGDRPVERAISYPINTPSIHRPLPLLPTLDRSPIKSEVPNF CDFSSPNNEVFRLSPSMSKEFPKSPAEELVTSPFPPNLINAHTNALSVKREPGMDEAHDFTMTTLKRKERLSQESDQGHS TSSSPVQNNESRLPLLLNFIQDRSPSS |
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