Gene
| Gene Model ID | pfu_aug1.0_13738.1_10642 |
|---|---|
| Locus | scaffold13738.1 : 6716 ... 13801 : + |
| To GenomeBrowser | scaffold13738.1:6716..13801 |
| Genes list of scaffold | scaffold13738.1 |
| Synonym | pfu_aug2.0_12.1_06732 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13738.1_10642.t1 | 4 | 1 | LRR_6 | 37 | 60 | 2.6e-12 | 45.4 | 0.0014 | 7.0 | 7.0 |
| pfu_aug1.0_13738.1_10642.t1 | 4 | 2 | LRR_6 | 103 | 121 | 2.6e-12 | 45.4 | 0.00012 | 0.59 | 10.3 |
| pfu_aug1.0_13738.1_10642.t1 | 4 | 3 | LRR_6 | 130 | 153 | 2.6e-12 | 45.4 | 1.7e-06 | 0.0083 | 16.0 |
| pfu_aug1.0_13738.1_10642.t1 | 4 | 4 | LRR_6 | 177 | 191 | 2.6e-12 | 45.4 | 0.0017 | 8.2 | 6.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_13738.1_10642.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13738.1_10642.t1 atgcataaaaatcactcaggacccattgatttccgatcgctgcgtcccactgtgtgcattgttcactttcgtataatgcc caaagacataattaaagagatagaagaatgtcgtacaatgacggcattacgtttggagggcaatacaatgggagtggagg ctgcagaagctatagctaaagcaatacaaaaacatccagaatttaagagggctctctggagtgatatgtttacaggccga cttaaaacagaaattcctaaagctctacagtttctgggtgatagcatgatacaggcgggcgttggtctggtagaacttga tctcagtgacaatgcattcggtcctaacggtgtggtagggctggtcgacttcattaagagtccaagctgttacacactac aggaattacgtcttaataataacggcctcggtattggagggggcaagatgttagcagaaagtttaacagaatgtcacaaa cggagcatggaagccggcaagccattctgcctcaaagtatttatatctggccgtaacagattagaaaatgacggtgcaat ggcattagctaaagtatttaag |
|
Protein
| Protein ID | pfu_aug1.0_13738.1_10642.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13738.1_10642.t1 MHKNHSGPIDFRSLRPTVCIVHFRIMPKDIIKEIEECRTMTALRLEGNTMGVEAAEAIAKAIQKHPEFKRALWSDMFTGR LKTEIPKALQFLGDSMIQAGVGLVELDLSDNAFGPNGVVGLVDFIKSPSCYTLQELRLNNNGLGIGGGKMLAESLTECHK RSMEAGKPFCLKVFISGRNRLENDGAMALAKVFK |
|