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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13760.1_03393
Locus scaffold13760.1 : 13398 ... 20735 : -
To GenomeBrowser scaffold13760.1:13398..20735
Genes list of scaffold scaffold13760.1
Synonym pfu_aug2.0_74.1_13533

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_13760.1_03393.t1 2 1 7tm_1 37 57 5.2e-08 32.3 0.31 1500.0 -2.0
pfu_aug1.0_13760.1_03393.t1 2 2 7tm_1 66 161 5.2e-08 32.3 1.0e-11 5.2e-08 32.3

Transcript
Transcript IDpfu_aug1.0_13760.1_03393.t1
Definition-
>pfu_aug1.0_13760.1_03393.t1
atgctcaatttggtgctctattgtatgaatgtgactgagtcatcagttcccagttcaatactggaaaacttcaccggaag
taacttctccatgactgaggaagacgatgtcgcagagaccgtgcaccccgttatcgtcgtcctgaattacgtcaactatg
tcatcttacccgtcttcctggttttaggtctgaccgggaataccctgaccattctagcgatgaacaccaagaggtttgcc
aatcagacgtccaggctattcctgacagcgctttcactatcagattcggtacttcttctaactcaacctttcaacaaact
gttcgtcattaatctccttggcatggacttgcgagctctcactgacgtaggatgcaaggcctttttcgtcattttcaaga
cggcaaagatgacgtcatcctggtttgtcgtattcctctgtctagagagattcgttgcagtatggttcccgatgaaactg
aagtacgattttcacaaggaccgttgccctgctggggatcgctgtcgtgtaccttgtcatcggtacgtacacgtctgtat
ggagctatgcctctcagatcgtcgatggaaaggtatgccaccccgacgtctacgacaagaaggacgcatacgaggtccaa
cgtttcggaagattcatcaccacaggccttgccatctactctatgatacctatagccatattactggtgattactccaat
gattatcataaagctcgtggtgagagccaaagctatgcgaaagatgacaaataa

Protein
Protein IDpfu_aug1.0_13760.1_03393.t1
Definition-
>pfu_aug1.0_13760.1_03393.t1
MLNLVLYCMNVTESSVPSSILENFTGSNFSMTEEDDVAETVHPVIVVLNYVNYVILPVFLVLGLTGNTLTILAMNTKRFA
NQTSRLFLTALSLSDSVLLLTQPFNKLFVINLLGMDLRALTDVGCKAFFVIFKTAKMTSSWFVVFLCLERFVAVWFPMKL
KYDFHKDRCPAGDRCRVPCHRYVHVCMELCLSDRRWKGMPPRRLRQEGRIRGPTFRKIHHHRPCHLLYDTYSHITGDYSN
DYHKARGESQSYAKDDK

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