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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13773.1_61257
Locus scaffold13773.1 : 406 ... 24219 : +
To GenomeBrowser scaffold13773.1:406..24219
Genes list of scaffold scaffold13773.1
Synonym pfu_aug2.0_2340.1_02093

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_13773.1_61257.t1 1 1 Neur_chan_LBD 42 240 1.2e-39 135.6 1.09301e-43 1.6e-39 135.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_13773.1_61257.t1 gi|194748088|ref|XP_001956481.1| GF24573 [Drosophila ananassae] 8.99998e-41

Transcript
Transcript IDpfu_aug1.0_13773.1_61257.t1
Definition-
>pfu_aug1.0_13773.1_61257.t1
atggagccatttaagtcaatgggtcgtgtattgtcagataaaagacctgattttattgagggagaaaagtccgttatgta
tgttattacatattgcttcgccctgtctccaatggagaatgtaacacgtctcctgaacgagctgctgagggactataaga
aggaagttaggccaggtttaggaggtccacctttacgcatccaaacaaacattttagtaagaagtatgggtcctgtagaa
gaaaacgaattgtcatattcaatgcagtgttacctacgccagagctggtacgatgatcgtctaaaatttgaccttgaaaa
tttgactcaggtcacactcagtaatagttttctcaaagacatttggaaaccaaacacgtactttctgaatggtagacgat
ctattcagccgaatatcacagtgcctaacgtctttgttaggatcagtagtaatggcagcgtttatatgtctagaagattg
actatccaagcaatatgtcctatgcaacttatggattacccaatggatagaccggtttgtccattgaaacttggaggata
acctcacgttcgcggcgcattcgtgccgcatttttctgcatccgtggtgccttcttctagcattcgggtccctgtaaagt
gcgaaacgaaacaaaaacgaaacgaaacgaaacgaaacaaatcggaacgaaacgaaacgaaacaaatcgaaacgaaacga
aacaaatcgaaacgaaacgaacaaaacgaaacgaaacagatcgaaacgaaacgaaacaagacataa

Protein
Protein IDpfu_aug1.0_13773.1_61257.t1
Definition-
>pfu_aug1.0_13773.1_61257.t1
MEPFKSMGRVLSDKRPDFIEGEKSVMYVITYCFALSPMENVTRLLNELLRDYKKEVRPGLGGPPLRIQTNILVRSMGPVE
ENELSYSMQCYLRQSWYDDRLKFDLENLTQVTLSNSFLKDIWKPNTYFLNGRRSIQPNITVPNVFVRISSNGSVYMSRRL
TIQAICPMQLMDYPMDRPVCPLKLGGXPHVRGAFVPHFSASVVPSSSIRVPVKCETKQKRNETKRNKSERNETKQIETKR
NKSKRNEQNETKQIETKRNKT

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